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A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish (73 views)

Pizzo E, Merlino A, Turano M, Russo Krauss I, Coscia F, Zanfardino A, Varcamonti M, Furia A, Giancola C, Mazzarella L, Sica F, D'Alessio G

Biochem J (ISSN: 1470-8728electronic, 0264-6021linking, 0264-6021print), 2011 Jan 15; 433(2): 345-355.

Abstract
Recently, extracellular RNases of the RNase A superfamily, with the characteristic CKxxNTF sequence signature, have been identified in fish. This has led to the recognition that these RNases are present in the whole vertebrate subphylum. In fact, they comprise the only enzyme family unique to vertebrates. Four RNases from zebrafish (Danio rerio) have been previously reported and have a very low RNase activity; some of these are endowed, like human angiogenin, with powerful angiogenic and bactericidal activities. In the present paper, we report the three-dimensional structure, the thermodynamic behaviour and the biological properties of a novel zebrafish RNase, ZF-RNase-5. The investigation of its structural and functional properties, extended to all other subfamily members, provides an inclusive description of the whole zebrafish RNase subfamily. The Authors Journal compilation 2011 Biochemical Society

Affiliations ▼
*** IBB - CNR Affiliation

Dipartimento di Biologia Strutturale e Funzionale, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy

Dipartimento di Chimica, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy

Istituto di Biostrutture e Bioimmagini, Consiglio Nazionale Delle Ricerche (CNR), Via Mezzocannone 16, I-80134 Naples, Italy

Details ▼
Impact factor: 4.897, 5-year impact factor: 4.693

Paper type: Journal Article, Research Support, Non-U. S. Gov'T,

Keywords: Angiogenin, Bactericidal Activity, Rnase, Vertebrate, Zebrafish (zf) (danio Rerio), Enzyme, Ribonuclease, Unclassified Drug, Article, Biological Activity, Controlled Study, Drug Structure, Human, Nonhuman, Priority Journal, Thermodynamics, Zebra Fish, Amino Acid Sequence, Animals, Cells, Cultured, Gene Expression Regulation, Developmental, Enzymologic, Models, Molecular, Molecular Sequence Data, Protein Structure, Tertiary, Pancreatic, Sequence Alignment, Pancreatic Chemistry, Genetics, Metabolism, Ribonucleases Chemistry, Embryology, Genetics Metabolism, Pancreatic Chemistry Genetics Metabolism, Ribonucleases Chemistry Genetics Metabolism, Zebrafish Embryology Genetics Metabolism,

Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-78651266853&partnerID=40&md5=30a61a9b637299df0873584fb2dc55dc

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Covassin, L. D., Siekmann, A. F., Kacergis, M. C., Laver, E., Moore, J. C., Villefranc, J. A., Weinstein, B. M., Lawson, N. D., A genetic screen for vascular mutants in zebrafish reveals dynamic roles for Vegf/Plcg1 signaling during artery development (2009) Dev. Biol., 329, pp. 212-226

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Monti, D. M., Yu, W., Pizzo, E., Shima, K., Hu, M. G., Di Malta, C., Piccoli, R., Hu, G. F., Characterization of the angiogenic activity of zebrafish ribonucleases (2009) FEBS J., 276, pp. 4077-4090

Rosenberg, H. F., Recombinant human eosinophil cationic protein ribonuclease activity is not essential for cytotoxicity (1995) J. Biol. Chem., 270, pp. 7876-7881

Kelemen, B. R., Klink, T. A., Behlke, M. A., Eubanks, S. R., Leland, P. A., Raines, R. T., Hypersensitive substrate for ribonucleases (1999) Nucleic Acids Res., 27, pp. 3696-3701

Venyaminov, S. Y., Yang, J. T., Determination of protein secondary structure (1996) Circular Dichroism and the Conformational Analysis of Biomolecules, pp. 69-107. , Fasman, G. D., ed., Plenum Press, New York

McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C., Read, R. J., Likelihood-enhanced fast translation functions (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 458-464

Acharya, K. R., Shapiro, R., Riordan, J. F., Vallee, B. L., Crystal structure of bovine angiogenin at 1. 5- resolution (1995) Proc. Natl. Acad. Sci U. S. A., 92, pp. 2949-2953

Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Pannu, N. S., Crystallography & NMR system: A new software suite for macromolecular structure determination (1998) Acta Crystallogr. D Biol. Crystallogr., 54, pp. 905-921

Jones, T. A., Zou, J. Y., Cowan, S. W., Kjedgaard, M., Improved methods for binding protein models in electron density maps and the location of errors in these models (1991) Acta Crystallogr. D Biol. Crystallogr., 56, pp. 714-721

Laskowski, R. A., MacArthur, M. W., Moss, M. D., Thornton, J. M., PROCHECK: A program to check the stereochemical quality of protein structure (1993) J. Appl. Crystallogr., 26, pp. 283-291

Hooft, R. W., Vriend, G., Sander, C., Abola, E. E., Errors in protein structures (1996) Nature, 381, p. 272

Sippl, M. J., Recognition of errors in three-dimensional structures of proteins (1993) Proteins, 17, pp. 355-362

Sippl, M. J., Knowledge-based potentials for proteins (1995) Curr. Opin. Struct. Biol., 5, pp. 229-235

Holloway, D. E., Chavali, G. B., Hares, M. C., Subramanian, V., Acharya, K. R., Structure of murine angiogenin: Features of the substrate- and cell-binding regions and prospects for inhibitor-binding studies (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 1568-1578

Leonidas, D. D., Chavali, G. B., Jardine, A. M., Li, S., Shapiro, R., Acharya, K. R., Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography (2001) Protein Sci., 10, pp. 1669-1676

Leland, P. A., Staniszewski, K. E., Park, C., Kelemen, B. R., Raines, R. T., The ribonucleolytic activity of angiogenin (2002) Biochemistry, 41, pp. 1343-1350

Schultz, L. W., Quirk, D. J., Raines, R. T., His. Asp catalytic dyad of ribonuclease A: Structure and function of the wild-type, D121N, and D121A enzymes (1998) Biochemistry, 37, pp. 8886-8898

Huang, Y. C., Lin, Y. M., Chang, T. W., Wu, S. J., Lee, Y. S., Chang, M. D., Chen, C., Liao, Y. D., The flexible and clustered lysine residues of human ribonuclease 7 are critical for membrane permeability and antimicrobial activity (2007) J. Biol. Chem., 282, pp. 4626-4633

Nitto, T., Dyer, K. D., Czapiga, M., Rosenberg, H. F., Evolution and function of leukocyte RNase a ribonucleases of the avian species, Gallus gallus (2006) J. Biol. Chem., 281, pp. 25622-25634


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6 Records (6 excluding Abstracts and Conferences).
Total impact factor: 24.462 (24.462 excluding Abstracts and Conferences).
Total 5-year impact factor: 23.039 (23.039 excluding Abstracts and Conferences).



Your bibliography query: (([btitle, keywords, abstract] ANGIOGENIN)) AND NOT [id] = 8839



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