Photoinduced Electron Transfer in DNA: Charge Shift Dynamics between 8-Oxo-Guanine Anion and Adenine (182 visite)
J Phys Chem B (ISSN: 1520-6106, 1520-5207), 2015; 119(24): 7491-7502.
Tipo di articolo: Journal Article,
Impact factor: 3.187, Impact factor a 5 anni: 3.265
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-84934982620&partnerID=40&md5=a3a1c81009840a9820f5f09bbc2edbbf
Parole chiave: Electron Transitions, Excited States, Nucleotides, Adenine Radicals, Back Electron Transfer, Excited-State Dynamics, Femtosecond Time-Resolved, Non-Adiabatic Electron Transfer Theory, Photo-Induced Electron Transfer, Reorganization Energies, Free Radical Reactions,
Affiliazioni:
*** IBB - CNR ***
Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, United States
CNR-Consiglio Nazionale Delle Ricerche Istituto di Biostrutture e Bioimmagini (IBB-CNR), Via Mezzocannone 16, Napoli, Italy
School of Medicine and Biomedical Sciences, The University at Buffalo, SUNY, Buffalo, NY, United States
Riferimenti:
Nguyen, K.V., Burrows, C.J., A Prebiotic Role for 8-Oxoguanosine as a Flavin Mimic in Pyrimidine Dimer Photorepair (2011) J. Am. Chem. Soc., 133, pp. 14586-1458
Kao, Y.T., Saxena, C., He, T.F., Guo, L.J., Wang, L.J., Sancar, A., Zhong, D.P., Ultrafast Dynamics of Flavins in Five Redox States (2008) J. Am. Chem. Soc., 130, pp. 13132-13139
Kao, Y.T., Song, Q.H., Saxena, C., Wang, L.J., Zhong, D.P., Dynamics and Mechanism of DNA Repair in a Biomimetic System: Flavin-Thymine Dimer Adduct (2012) J. Am. Chem. Soc., 134, pp. 1501-1503
Sancar, A., Structure and Function of DNA Photolyase and Cryptochrome Blue-Light Photoreceptors (2003) Chem. Rev., 103, pp. 2203-2237
Liu, Z.Y., Tan, C., Guo, X.M., Kao, Y.T., Li, J., Wang, L.J., Sancar, A., Zhong, D.P., Dynamics and Mechanism of Cyclobutane Pyrimidine Dimer Repair by DNA Photolyase (2011) Proc. Natl. Acad. Sci. U.S.A., 108, pp. 14831-14836
Zhang, Y., Dood, J., Beckstead, A.A., Li, X.B., Nguyen, K.V., Burrows, C.J., Improta, R., Kohler, B., Efficient UV-Induced Charge Separation and Recombination in an 8-Oxoguanine-Containing Dinucleotide (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 11612-11617
Culp, S.J., Cho, B.P., Kadlubar, F.F., Evans, F.E., Structural and Conformational Analyses of 8-Hydroxy-2′-Deoxyguanosine (1989) Chem. Res. Toxicol., 2, pp. 416-422
Hartman, R.F., Rose, S.D., Efficient Photosensitized Pyrimidine Dimer Splitting by a Reduced Flavin Requires the Deprotonated Flavin (1992) J. Am. Chem. Soc., 114, pp. 3559-3560
Epple, R., Wallenborn, E.-U., Carell, T., Investigation of Flavin-Containing DNA-Repair Model Compounds (1997) J. Am. Chem. Soc., 119, pp. 7440-7451
Closs, G.L., Miller, J.R., Intramolecular Long-Distance Electron-Transfer in Organic-Molecules (1988) Science, 240, pp. 440-447
Miller, J.R., Calcaterra, L.T., Closs, G.L., Intramolecular Long-Distance Electron-Transfer in Radical-Anions: The Effects of Free-Energy and Solvent on the Reaction-Rates (1984) J. Am. Chem. Soc., 106, pp. 3047-3049
Miller, J.R., Beitz, J.V., Huddleston, R.K., Effect of Free-Energy on Rates of Electron-Transfer between Molecules (1984) J. Am. Chem. Soc., 106, pp. 5057-5068
Doorley, G.W., Wojdyla, M., Watson, G.W., Towrie, M., Parker, A.W., Kelly, J.M., Quinn, S.J., Tracking DNA Excited States by Picosecond-Time-Resolved Infrared Spectroscopy: Signature Band for a Charge-Transfer Excited State in Stacked Adenine-Thymine Systems (2013) J. Phys. Chem. Lett., 4, pp. 2739-2744
Bucher, D.B., Pilles, B.M., Carell, T., Zinth, W., Charge Seperation and Charge Delocalization Identified in Long-living States of Photoexcited DNA (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 4369-4374
Crespo-Hernández, C.E., Cohen, B., Kohler, B., Base Stacking Controls Excited-state Dynamics in A-T DNA (2005) Nature, 436, pp. 1141-1144
Su, C., Middleton, C.T., Kohler, B., Base-Stacking Disorder and Excited-State Dynamics in Single-Stranded Adenine Homo-oligonucleotides (2012) J. Phys. Chem. B, 116, pp. 10266-10274
Chen, J., Kohler, B., Base Stacking in Adenosine Dimers Revealed by Femtosecond Transient Absorption Spectroscopy (2014) J. Am. Chem. Soc., 136, pp. 6362-6372
Zhang, Y., Chen, J., Kohler, B., Hydrogen Bond Donors Accelerate Vibrational Cooling of Hot Purine Derivatives in Heavy Water (2013) J. Phys. Chem. A, 117, pp. 6771-6780
De Koning, M.C., Ghisaidoobe, A.B.T., Duynstee, H.I., Ten Kortenaar, P.B.W., Filippov, D.V., Van Der Marel, G.A., Simple and Efficient Solution-phase Synthesis of Oligonucleotides Using Extractive Work-up (2006) Org. Process Res. Dev., 10, pp. 1238-1245
Adamo, C., Barone, V., Toward Reliable Density Functional Methods without Adjustable Parameters: The PBE0 Model (1999) J. Chem. Phys., 110, pp. 6158-6170
Ernzerhof, M., Scuseria, G.E., Assessment of the Perdew-Burke-Ernzerhof Exchange-Correlation Functional (1999) J. Chem. Phys., 110, pp. 5029-5036
Zhang, Y., Improta, R., Kohler, B., Mode-specific Vibrational Relaxation of Photoexcited Guanosine 5′-Monophosphate and Its Acid Form: A Femtosecond Broadband Mid-IR Transient Absorption and Theoretical Study (2014) Phys. Chem. Chem. Phys., 16, pp. 1487-1499
Petrone, A., Donati, G., Caruso, P., Rega, N., Understanding THz and IR Signals beneath Time-Resolved Fluorescence from Excited-State Ab Initio Dynamics (2014) J. Am. Chem. Soc., 136, pp. 14866-14874
Dreuw, A., Head-Gordon, M., Single-Reference ab initio Methods for the Calculation of Excited States of Large Molecules (2005) Chem. Rev., 105, pp. 4009-4037
Improta, R., Barone, V., Scalmani, G., Frisch, M.J., A State-Specific Polarizable Continuum Model Time-Dependent Density Functional Theory Method for Excited State Calculations in Solution (2006) J. Chem. Phys., 125, p. 054103
Improta, R., Scalmani, G., Frisch, M.J., Barone, V., Toward Effective and Reliable Fluorescence Energies in Solution by a New State-Specific Polarizable Continuum Model Time-Dependent Density Functional Theory Approach (2007) J. Chem. Phys., 127, p. 074504
Tomasi, J., Mennucci, B., Cammi, R., Quantum Mechanical Continuum Solvation Models (2005) Chem. Rev., 105, pp. 2999-3093
Schreier, W.J., Schrader, T.E., Koller, F.O., Gilch, P., Crespo-Hernández, C.E., Swaminathan, V.N., Carell, T., Kohler, B., Thymine Dimerization in DNA is an Ultrafast Photoreaction (2007) Science, 315, pp. 625-629
Larsen, D.S., Van Stokkum, I.H.M., Vengris, M., Van Der Horst, M.A., De Weerd, F.L., Hellingwerf, K.J., Van Grondelle, R., Incoherent Manipulation of the Photoactive Yellow Protein Photocycle with Dispersed Pump-Dump-Probe Spectroscopy (2004) Biophys. J., 87, pp. 1858-1872
Larsen, D.S., Vengris, M., Van Stokkum, I.H.M., Van Der Horst, M.A., De Weerd, F.L., Hellingwerf, K.J., Van Grondelle, R., Photoisomerization and Photoionization of the Photoactive Yellow Protein Chromophore in Solution (2004) Biophys. J., 86, pp. 2538-2550
Stuhldreier, M.C., Temps, F., Ultrafast Photo-Initiated Molecular Quantum Dynamics in the DNA Dinucleotide d(ApG) Revealed by Broadband Transient Absorption Spectroscopy (2013) Faraday Discuss., 163, pp. 173-188
Takaya, T., Su, C., De La Harpe, K., Crespo-Hernández, C.E., Kohler, B., UV Excitation of Single DNA and RNA Strands Produces High Yields of Exciplex States between Two Stacked Bases (2008) Proc. Natl. Acad. Sci. U.S.A., 105, pp. 10285-10290
Steenken, S., Jovanovic, S.V., Bietti, M., Bernhard, K., The Trap Depth (in DNA) of 8-Oxo-7,8-Dihydro-2′-Deoxyguanosine As Derived from Electron-transfer Equilibria in Aqueous Solution (2000) J. Am. Chem. Soc., 122, pp. 2373-2374
Seidel, C.A.M., Schulz, A., Sauer, M.H.M., Nucleobase-Specific Quenching of Fluorescent Dyes. 1. Nucleobase One-Electron Redox Potentials and Their Correlation with Static and Dynamic Quenching Efficiencies (1996) J. Phys. Chem., 100, pp. 5541-5553
Scannell, M.P., Fenick, D.J., Yeh, S.R., Falvey, D.E., Model Studies of DNA Photorepair: Reduction Potentials of Thymine and Cytosine Cyclobutane Dimers Measured by Fluorescence Quenching (1997) J. Am. Chem. Soc., 119, pp. 1971-1977
Pavlishchuk, V.V., Addison, A.W., Conversion Constants for Redox Potentials Measured Versus Different Reference Electrodes in Acetonitrile Solutions at 25 °c (2000) Inorg. Chim. Acta, 298, pp. 97-102
Rehm, D., Weller, A., Kinetics of Fluorescence Quenching by Electron and H-atom Transfer (1970) Isr. J. Chem., 8, pp. 259-271
Psciuk, B.T., Schlegel, H.B., Computational Prediction of One-Electron Reduction Potentials and Acid Dissociation Constants for Guanine Oxidation Intermediates and Products (2013) J. Phys. Chem. B, 117, pp. 9518-9531
Kloepfer, J.A., Vilchiz, V.H., Lenchenkov, V.A., Germaine, A.C., Bradforth, S.E., The Ejection Distribution of Solvated Electrons Generated by the One-photon Photodetachment of Aqueous I- and Two-Photon Ionization of the Solvent (2000) J. Chem. Phys., 113, pp. 6288-6307
Chen, X.Y., Larsen, D.S., Bradforth, S.E., Van Stokkum, I.H.M., Broadband Spectral Probing Revealing Ultrafast Photochemical Branching after Ultraviolet Excitation of the Aqueous Phenolate Anion (2011) J. Phys. Chem. A, 115, pp. 3807-3819
Gould, I.R., Moser, J.E., Armitage, B., Farid, S., Goodman, J.L., Herman, M.S., Electron-Transfer Reactions in the Marcus Inverted Region: Charge Recombination Versus Charge Shift Reactions (1989) J. Am. Chem. Soc., 111, pp. 1917-1919
Tavernier, H.L., Fayer, M.D., Distance Dependence of Electron Transfer in DNA: The Role of the Reorganization Energy and Free Energy (2000) J. Phys. Chem. B, 104, pp. 11541-11550
Jin, R., Breslauer, K.J., Characterization of the Minor Groove Environment in a Drug DNA Complex: Bisbenzimide Bound to the Poly[d(AT)]·Poly[d(AT)] Duplex (1988) Proc. Natl. Acad. Sci. U.S.A., 85, pp. 8939-8942
Cuervo, A., Dans, P.D., Carrascosa, J.L., Orozco, M., Gomila, G., Fumagalli, L., Direct Measurement of the Dielectric Polarization Properties of DNA (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 3624-E3630
Hopfield, J.J., Electron-Transfer between Biological Molecules by Thermally Activated Tunneling (1974) Proc. Natl. Acad. Sci. U.S.A., 71, pp. 3640-3644
Jortner, J., Temperature-Dependent Activation-Energy for Electron-Transfer between Biological Molecules (1976) J. Chem. Phys., 64, pp. 4860-4867
Moser, C.C., Keske, J.M., Warncke, K., Farid, R.S., Dutton, P.L., Nature of Biological Electron Transfer (1992) Nature, 355, pp. 796-802
Kao, Y.T., Guo, X.M., Yang, Y., Liu, Z.Y., Hassanali, A., Song, Q.H., Wang, L.J., Zhong, D.P., Ultrafast Dynamics of Nonequilibrium Electron Transfer in Photoinduced Redox Cycle: Solvent Mediation and Conformation Flexibility (2012) J. Phys. Chem. B, 116, pp. 9130-9140
Heitele, H., Pollinger, F., Haberle, T., Michelbeyerle, M.E., Staab, H.A., Energy-Gap and Temperature-Dependence of Photoinduced Electron-Transfer in Porphyrin-Quinone Cyclophanes (1994) J. Phys. Chem., 98, pp. 7402-7410
Lewis, F.D., Kalgutkar, R.S., Wu, Y.S., Liu, X.Y., Liu, J.Q., Hayes, R.T., Miller, S.E., Wasielewski, M.R., Driving Force Dependence of Electron Transfer Dynamics in Synthetic DNA Hairpins (2000) J. Am. Chem. Soc., 122, pp. 12346-12351
Gould, I.R., Young, R.H., Moody, R.E., Farid, S., Contact and Solvent-Separated Geminate Radical Ion-Pairs in Electron-Transfer Photochemistry (1991) J. Phys. Chem., 95, pp. 2068-2080
Siriwong, K., Voityuk, A.A., Newton, M.D., Rösch, N., Estimate of the Reorganization Energy for Charge Transfer in DNA (2003) J. Phys. Chem. B, 107, pp. 2595-2601
Lebard, D.N., Lilichenko, M., Matyushov, D.V., Berlin, Y.A., Ratner, M.A., Solvent Reorganization Energy of Charge Transfer in DNA Hairpins (2003) J. Phys. Chem. B, 107, pp. 14509-14520
Steinbrecher, T., Koslowski, T., Case, D.A., Direct Simulation of Electron Transfer Reactions in DNA Radical Cations (2008) J. Phys. Chem. B, 112, pp. 16935-16944
Vladimirov, E., Ivanova, A., Rosch, N., Solvent Reorganization Energies in A-DNA, B-DNA, and Rhodamine 6G-DNA Complexes from Molecular Dynamics Simulations with a Polarizable Force Field (2009) J. Phys. Chem. B, 113, pp. 4425-4434
Barbara, P.F., Meyer, T.J., Ratner, M.A., Contemporary Issues in Electron Transfer Research (1996) J. Phys. Chem., 100, pp. 13148-13168
Jimenez, R., Fleming, G.R., Kumar, P.V., Maroncelli, M., Femtosecond Solvation Dynamics of Water (1994) Nature, 369, pp. 471-473
Senthilkumar, K., Grozema, F.C., Guerra, C.F., Bickelhaupt, F.M., Lewis, F.D., Berlin, Y.A., Ratner, M.A., Siebbeles, L.D.A., Absolute Rates of Hole Transfer in DNA (2005) J. Am. Chem. Soc., 127, pp. 14894-14903
Lewis, F.D., Distance-Dependent Electronic Interactions Across DNA Base Pairs: Charge Transport, Exciton Coupling, and Energy Transfer (2013) Isr. J. Chem., 53, pp. 350-365
Kawai, K., Majima, T., Hole Transfer Kinetics of DNA (2013) Acc. Chem. Res., 46, pp. 2616-2625
Lewis, F.D., Liu, X.Y., Miller, S.E., Hayes, R.T., Wasielewski, M.R., Dynamics of Electron Injection in DNA Hairpins (2002) J. Am. Chem. Soc., 124, pp. 11280-11281
Genereux, J.C., Barton, J.K., Mechanisms for DNA Charge Transport (2010) Chem. Rev., 110, pp. 1642-1662
Kubar, T., Elstner, M., Solvent Reorganization Energy of Hole Transfer in DNA (2009) J. Phys. Chem. B, 113, pp. 5653-5656
Liu, Z.Y., Zhang, M., Guo, X.M., Tan, C., Li, J., Wang, L.J., Sancar, A., Zhong, D.P., Dynamic Determination of the Functional State in Photolyase and the Implication for Cryptochrome (2013) Proc. Natl. Acad. Sci. U.S.A., 110, pp. 12972-12977
J Phys Chem B (ISSN: 1520-6106, 1520-5207), 2015; 119(24): 7491-7502.
Tipo di articolo: Journal Article,
Impact factor: 3.187, Impact factor a 5 anni: 3.265
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-84934982620&partnerID=40&md5=a3a1c81009840a9820f5f09bbc2edbbf
Parole chiave: Electron Transitions, Excited States, Nucleotides, Adenine Radicals, Back Electron Transfer, Excited-State Dynamics, Femtosecond Time-Resolved, Non-Adiabatic Electron Transfer Theory, Photo-Induced Electron Transfer, Reorganization Energies, Free Radical Reactions,
Affiliazioni:
*** IBB - CNR ***
Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT, United States
CNR-Consiglio Nazionale Delle Ricerche Istituto di Biostrutture e Bioimmagini (IBB-CNR), Via Mezzocannone 16, Napoli, Italy
School of Medicine and Biomedical Sciences, The University at Buffalo, SUNY, Buffalo, NY, United States
Riferimenti:
Nguyen, K.V., Burrows, C.J., A Prebiotic Role for 8-Oxoguanosine as a Flavin Mimic in Pyrimidine Dimer Photorepair (2011) J. Am. Chem. Soc., 133, pp. 14586-1458
Kao, Y.T., Saxena, C., He, T.F., Guo, L.J., Wang, L.J., Sancar, A., Zhong, D.P., Ultrafast Dynamics of Flavins in Five Redox States (2008) J. Am. Chem. Soc., 130, pp. 13132-13139
Kao, Y.T., Song, Q.H., Saxena, C., Wang, L.J., Zhong, D.P., Dynamics and Mechanism of DNA Repair in a Biomimetic System: Flavin-Thymine Dimer Adduct (2012) J. Am. Chem. Soc., 134, pp. 1501-1503
Sancar, A., Structure and Function of DNA Photolyase and Cryptochrome Blue-Light Photoreceptors (2003) Chem. Rev., 103, pp. 2203-2237
Liu, Z.Y., Tan, C., Guo, X.M., Kao, Y.T., Li, J., Wang, L.J., Sancar, A., Zhong, D.P., Dynamics and Mechanism of Cyclobutane Pyrimidine Dimer Repair by DNA Photolyase (2011) Proc. Natl. Acad. Sci. U.S.A., 108, pp. 14831-14836
Zhang, Y., Dood, J., Beckstead, A.A., Li, X.B., Nguyen, K.V., Burrows, C.J., Improta, R., Kohler, B., Efficient UV-Induced Charge Separation and Recombination in an 8-Oxoguanine-Containing Dinucleotide (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 11612-11617
Culp, S.J., Cho, B.P., Kadlubar, F.F., Evans, F.E., Structural and Conformational Analyses of 8-Hydroxy-2′-Deoxyguanosine (1989) Chem. Res. Toxicol., 2, pp. 416-422
Hartman, R.F., Rose, S.D., Efficient Photosensitized Pyrimidine Dimer Splitting by a Reduced Flavin Requires the Deprotonated Flavin (1992) J. Am. Chem. Soc., 114, pp. 3559-3560
Epple, R., Wallenborn, E.-U., Carell, T., Investigation of Flavin-Containing DNA-Repair Model Compounds (1997) J. Am. Chem. Soc., 119, pp. 7440-7451
Closs, G.L., Miller, J.R., Intramolecular Long-Distance Electron-Transfer in Organic-Molecules (1988) Science, 240, pp. 440-447
Miller, J.R., Calcaterra, L.T., Closs, G.L., Intramolecular Long-Distance Electron-Transfer in Radical-Anions: The Effects of Free-Energy and Solvent on the Reaction-Rates (1984) J. Am. Chem. Soc., 106, pp. 3047-3049
Miller, J.R., Beitz, J.V., Huddleston, R.K., Effect of Free-Energy on Rates of Electron-Transfer between Molecules (1984) J. Am. Chem. Soc., 106, pp. 5057-5068
Doorley, G.W., Wojdyla, M., Watson, G.W., Towrie, M., Parker, A.W., Kelly, J.M., Quinn, S.J., Tracking DNA Excited States by Picosecond-Time-Resolved Infrared Spectroscopy: Signature Band for a Charge-Transfer Excited State in Stacked Adenine-Thymine Systems (2013) J. Phys. Chem. Lett., 4, pp. 2739-2744
Bucher, D.B., Pilles, B.M., Carell, T., Zinth, W., Charge Seperation and Charge Delocalization Identified in Long-living States of Photoexcited DNA (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 4369-4374
Crespo-Hernández, C.E., Cohen, B., Kohler, B., Base Stacking Controls Excited-state Dynamics in A-T DNA (2005) Nature, 436, pp. 1141-1144
Su, C., Middleton, C.T., Kohler, B., Base-Stacking Disorder and Excited-State Dynamics in Single-Stranded Adenine Homo-oligonucleotides (2012) J. Phys. Chem. B, 116, pp. 10266-10274
Chen, J., Kohler, B., Base Stacking in Adenosine Dimers Revealed by Femtosecond Transient Absorption Spectroscopy (2014) J. Am. Chem. Soc., 136, pp. 6362-6372
Zhang, Y., Chen, J., Kohler, B., Hydrogen Bond Donors Accelerate Vibrational Cooling of Hot Purine Derivatives in Heavy Water (2013) J. Phys. Chem. A, 117, pp. 6771-6780
De Koning, M.C., Ghisaidoobe, A.B.T., Duynstee, H.I., Ten Kortenaar, P.B.W., Filippov, D.V., Van Der Marel, G.A., Simple and Efficient Solution-phase Synthesis of Oligonucleotides Using Extractive Work-up (2006) Org. Process Res. Dev., 10, pp. 1238-1245
Adamo, C., Barone, V., Toward Reliable Density Functional Methods without Adjustable Parameters: The PBE0 Model (1999) J. Chem. Phys., 110, pp. 6158-6170
Ernzerhof, M., Scuseria, G.E., Assessment of the Perdew-Burke-Ernzerhof Exchange-Correlation Functional (1999) J. Chem. Phys., 110, pp. 5029-5036
Zhang, Y., Improta, R., Kohler, B., Mode-specific Vibrational Relaxation of Photoexcited Guanosine 5′-Monophosphate and Its Acid Form: A Femtosecond Broadband Mid-IR Transient Absorption and Theoretical Study (2014) Phys. Chem. Chem. Phys., 16, pp. 1487-1499
Petrone, A., Donati, G., Caruso, P., Rega, N., Understanding THz and IR Signals beneath Time-Resolved Fluorescence from Excited-State Ab Initio Dynamics (2014) J. Am. Chem. Soc., 136, pp. 14866-14874
Dreuw, A., Head-Gordon, M., Single-Reference ab initio Methods for the Calculation of Excited States of Large Molecules (2005) Chem. Rev., 105, pp. 4009-4037
Improta, R., Barone, V., Scalmani, G., Frisch, M.J., A State-Specific Polarizable Continuum Model Time-Dependent Density Functional Theory Method for Excited State Calculations in Solution (2006) J. Chem. Phys., 125, p. 054103
Improta, R., Scalmani, G., Frisch, M.J., Barone, V., Toward Effective and Reliable Fluorescence Energies in Solution by a New State-Specific Polarizable Continuum Model Time-Dependent Density Functional Theory Approach (2007) J. Chem. Phys., 127, p. 074504
Tomasi, J., Mennucci, B., Cammi, R., Quantum Mechanical Continuum Solvation Models (2005) Chem. Rev., 105, pp. 2999-3093
Schreier, W.J., Schrader, T.E., Koller, F.O., Gilch, P., Crespo-Hernández, C.E., Swaminathan, V.N., Carell, T., Kohler, B., Thymine Dimerization in DNA is an Ultrafast Photoreaction (2007) Science, 315, pp. 625-629
Larsen, D.S., Van Stokkum, I.H.M., Vengris, M., Van Der Horst, M.A., De Weerd, F.L., Hellingwerf, K.J., Van Grondelle, R., Incoherent Manipulation of the Photoactive Yellow Protein Photocycle with Dispersed Pump-Dump-Probe Spectroscopy (2004) Biophys. J., 87, pp. 1858-1872
Larsen, D.S., Vengris, M., Van Stokkum, I.H.M., Van Der Horst, M.A., De Weerd, F.L., Hellingwerf, K.J., Van Grondelle, R., Photoisomerization and Photoionization of the Photoactive Yellow Protein Chromophore in Solution (2004) Biophys. J., 86, pp. 2538-2550
Stuhldreier, M.C., Temps, F., Ultrafast Photo-Initiated Molecular Quantum Dynamics in the DNA Dinucleotide d(ApG) Revealed by Broadband Transient Absorption Spectroscopy (2013) Faraday Discuss., 163, pp. 173-188
Takaya, T., Su, C., De La Harpe, K., Crespo-Hernández, C.E., Kohler, B., UV Excitation of Single DNA and RNA Strands Produces High Yields of Exciplex States between Two Stacked Bases (2008) Proc. Natl. Acad. Sci. U.S.A., 105, pp. 10285-10290
Steenken, S., Jovanovic, S.V., Bietti, M., Bernhard, K., The Trap Depth (in DNA) of 8-Oxo-7,8-Dihydro-2′-Deoxyguanosine As Derived from Electron-transfer Equilibria in Aqueous Solution (2000) J. Am. Chem. Soc., 122, pp. 2373-2374
Seidel, C.A.M., Schulz, A., Sauer, M.H.M., Nucleobase-Specific Quenching of Fluorescent Dyes. 1. Nucleobase One-Electron Redox Potentials and Their Correlation with Static and Dynamic Quenching Efficiencies (1996) J. Phys. Chem., 100, pp. 5541-5553
Scannell, M.P., Fenick, D.J., Yeh, S.R., Falvey, D.E., Model Studies of DNA Photorepair: Reduction Potentials of Thymine and Cytosine Cyclobutane Dimers Measured by Fluorescence Quenching (1997) J. Am. Chem. Soc., 119, pp. 1971-1977
Pavlishchuk, V.V., Addison, A.W., Conversion Constants for Redox Potentials Measured Versus Different Reference Electrodes in Acetonitrile Solutions at 25 °c (2000) Inorg. Chim. Acta, 298, pp. 97-102
Rehm, D., Weller, A., Kinetics of Fluorescence Quenching by Electron and H-atom Transfer (1970) Isr. J. Chem., 8, pp. 259-271
Psciuk, B.T., Schlegel, H.B., Computational Prediction of One-Electron Reduction Potentials and Acid Dissociation Constants for Guanine Oxidation Intermediates and Products (2013) J. Phys. Chem. B, 117, pp. 9518-9531
Kloepfer, J.A., Vilchiz, V.H., Lenchenkov, V.A., Germaine, A.C., Bradforth, S.E., The Ejection Distribution of Solvated Electrons Generated by the One-photon Photodetachment of Aqueous I- and Two-Photon Ionization of the Solvent (2000) J. Chem. Phys., 113, pp. 6288-6307
Chen, X.Y., Larsen, D.S., Bradforth, S.E., Van Stokkum, I.H.M., Broadband Spectral Probing Revealing Ultrafast Photochemical Branching after Ultraviolet Excitation of the Aqueous Phenolate Anion (2011) J. Phys. Chem. A, 115, pp. 3807-3819
Gould, I.R., Moser, J.E., Armitage, B., Farid, S., Goodman, J.L., Herman, M.S., Electron-Transfer Reactions in the Marcus Inverted Region: Charge Recombination Versus Charge Shift Reactions (1989) J. Am. Chem. Soc., 111, pp. 1917-1919
Tavernier, H.L., Fayer, M.D., Distance Dependence of Electron Transfer in DNA: The Role of the Reorganization Energy and Free Energy (2000) J. Phys. Chem. B, 104, pp. 11541-11550
Jin, R., Breslauer, K.J., Characterization of the Minor Groove Environment in a Drug DNA Complex: Bisbenzimide Bound to the Poly[d(AT)]·Poly[d(AT)] Duplex (1988) Proc. Natl. Acad. Sci. U.S.A., 85, pp. 8939-8942
Cuervo, A., Dans, P.D., Carrascosa, J.L., Orozco, M., Gomila, G., Fumagalli, L., Direct Measurement of the Dielectric Polarization Properties of DNA (2014) Proc. Natl. Acad. Sci. U.S.A., 111, pp. 3624-E3630
Hopfield, J.J., Electron-Transfer between Biological Molecules by Thermally Activated Tunneling (1974) Proc. Natl. Acad. Sci. U.S.A., 71, pp. 3640-3644
Jortner, J., Temperature-Dependent Activation-Energy for Electron-Transfer between Biological Molecules (1976) J. Chem. Phys., 64, pp. 4860-4867
Moser, C.C., Keske, J.M., Warncke, K., Farid, R.S., Dutton, P.L., Nature of Biological Electron Transfer (1992) Nature, 355, pp. 796-802
Kao, Y.T., Guo, X.M., Yang, Y., Liu, Z.Y., Hassanali, A., Song, Q.H., Wang, L.J., Zhong, D.P., Ultrafast Dynamics of Nonequilibrium Electron Transfer in Photoinduced Redox Cycle: Solvent Mediation and Conformation Flexibility (2012) J. Phys. Chem. B, 116, pp. 9130-9140
Heitele, H., Pollinger, F., Haberle, T., Michelbeyerle, M.E., Staab, H.A., Energy-Gap and Temperature-Dependence of Photoinduced Electron-Transfer in Porphyrin-Quinone Cyclophanes (1994) J. Phys. Chem., 98, pp. 7402-7410
Lewis, F.D., Kalgutkar, R.S., Wu, Y.S., Liu, X.Y., Liu, J.Q., Hayes, R.T., Miller, S.E., Wasielewski, M.R., Driving Force Dependence of Electron Transfer Dynamics in Synthetic DNA Hairpins (2000) J. Am. Chem. Soc., 122, pp. 12346-12351
Gould, I.R., Young, R.H., Moody, R.E., Farid, S., Contact and Solvent-Separated Geminate Radical Ion-Pairs in Electron-Transfer Photochemistry (1991) J. Phys. Chem., 95, pp. 2068-2080
Siriwong, K., Voityuk, A.A., Newton, M.D., Rösch, N., Estimate of the Reorganization Energy for Charge Transfer in DNA (2003) J. Phys. Chem. B, 107, pp. 2595-2601
Lebard, D.N., Lilichenko, M., Matyushov, D.V., Berlin, Y.A., Ratner, M.A., Solvent Reorganization Energy of Charge Transfer in DNA Hairpins (2003) J. Phys. Chem. B, 107, pp. 14509-14520
Steinbrecher, T., Koslowski, T., Case, D.A., Direct Simulation of Electron Transfer Reactions in DNA Radical Cations (2008) J. Phys. Chem. B, 112, pp. 16935-16944
Vladimirov, E., Ivanova, A., Rosch, N., Solvent Reorganization Energies in A-DNA, B-DNA, and Rhodamine 6G-DNA Complexes from Molecular Dynamics Simulations with a Polarizable Force Field (2009) J. Phys. Chem. B, 113, pp. 4425-4434
Barbara, P.F., Meyer, T.J., Ratner, M.A., Contemporary Issues in Electron Transfer Research (1996) J. Phys. Chem., 100, pp. 13148-13168
Jimenez, R., Fleming, G.R., Kumar, P.V., Maroncelli, M., Femtosecond Solvation Dynamics of Water (1994) Nature, 369, pp. 471-473
Senthilkumar, K., Grozema, F.C., Guerra, C.F., Bickelhaupt, F.M., Lewis, F.D., Berlin, Y.A., Ratner, M.A., Siebbeles, L.D.A., Absolute Rates of Hole Transfer in DNA (2005) J. Am. Chem. Soc., 127, pp. 14894-14903
Lewis, F.D., Distance-Dependent Electronic Interactions Across DNA Base Pairs: Charge Transport, Exciton Coupling, and Energy Transfer (2013) Isr. J. Chem., 53, pp. 350-365
Kawai, K., Majima, T., Hole Transfer Kinetics of DNA (2013) Acc. Chem. Res., 46, pp. 2616-2625
Lewis, F.D., Liu, X.Y., Miller, S.E., Hayes, R.T., Wasielewski, M.R., Dynamics of Electron Injection in DNA Hairpins (2002) J. Am. Chem. Soc., 124, pp. 11280-11281
Genereux, J.C., Barton, J.K., Mechanisms for DNA Charge Transport (2010) Chem. Rev., 110, pp. 1642-1662
Kubar, T., Elstner, M., Solvent Reorganization Energy of Hole Transfer in DNA (2009) J. Phys. Chem. B, 113, pp. 5653-5656
Liu, Z.Y., Zhang, M., Guo, X.M., Tan, C., Li, J., Wang, L.J., Sancar, A., Zhong, D.P., Dynamic Determination of the Functional State in Photolyase and the Implication for Cryptochrome (2013) Proc. Natl. Acad. Sci. U.S.A., 110, pp. 12972-12977
Femtosecond time-resolved IR spectroscopy is used to investigate the excited-state dynamics of a dinucleotide containing an 8-oxoguanine anion at the 5′-end and neutral adenine at the 3′-end. UV excitation of the dinucleotide transfers an electron from deprotonated 8-oxoguanine to its γ-stacked neighbor adenine in less than 1 ps, generating a neutral 8-oxoguanine radical and an adenine radical anion. These species are identified by the excellent agreement between the experimental and calculated IR difference spectra. The quantum efficiency of this ultrafast charge shift reaction approaches unity. Back electron transfer from the adenine radical anion to the 8-oxguanine neutral radical occurs in 9 ps, or approximately 6 times faster than between the adenine radical anion and the 8-oxoguanine radical cation (Zhang, Y. et al. Proc. Natl. Acad. Sci. U.S.A. 2014, 111, 11612-11617). The large asymmetry in forward and back electron transfer rates is fully rationalized by semiclassical nonadiabatic electron transfer theory. Forward electron transfer is ultrafast because the driving force is nearly equal to the reorganization energy, which is estimated to lie between 1 and 2 eV. Back electron transfer is highly exergonic and takes place much more slowly in the Marcus inverted region. © 2015 American Chemical Society.
Nessun risultato. |
| The optical properties of adenine cation in different oligonucleotides: a PCM/TD-DFT study. (dominio pubblico) (33 visite) |
Vai a fine pagina Versione per copia e incolla facile Esporta tutto in BibTeX Esporta tutto in EndNote
Martinez-fernandez L, Gavvala K, Sharma R, Didier P, Richert L, Segarra Marti J, Mori M, Mely Y, Improta R
* Excited-State Dynamics of Thienoguanosine, an Isomorphic Highly Fluorescent Analogue of Guanosine (43 visite)
Chemistry (ISSN: 0947-6539linking), 2019 May 28; 25(30): 7375-7386.
Impact Factor: 5.16
Dettagli Esporta in BibTeX Esporta in EndNote
Marzano M, Falanga AP, D'Errico S, Pinto B, Roviello GN, Piccialli G, Oliviero G, Borbone N
* New G-quadruplex-forming oligodeoxynucleotides incorporating a bifunctional Double-Ended Linker (DEL): effects of DEL size and ODNs orientation on the topology, stability and molecularity of DEL-G-quadruplexes (75 visite)
Molecules (ISSN: 1420-3049linking, 1420-3049electronic), 2019 Feb 12; 24(3): 654-654.
Impact Factor: 3.06
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Martinez-fernandez L, Improta R, Ketola TM, Balty C, Markovitsi D
* Radicals generated in alternating guanine-cytosine duplexes by direct absorption of low-energy UV radiation (118 visite)
Phys Chem Chem Phys (ISSN: 1463-9084electronic, 1463-9076linking), 2018 Aug 22; 20(33): 21381-21389.
Impact Factor: 3.454
Dettagli Esporta in BibTeX Esporta in EndNote
Martinez-fernandez L, Improta R
* Sequence dependence on DNA photochemistry: a computational study of photodimerization pathways in TpdC and dCpT dinucleotides (54 visite)
Photochemical & (ISSN: 1474-9092electronic, 1474-905xlinking), 2018 May 16; 17(5): 586-591.
Impact Factor: 2.939
Dettagli Esporta in BibTeX Esporta in EndNote
Avitabile C, Diaferia C, Della Ventura B, Mercurio FA, Leone M, Roviello V, Saviano M, Velotta R, Morelli G, Accardo A, Romanelli A
* Self-Assembling of Fmoc-GC Peptide Nucleic Acid Dimers into Highly Fluorescent Aggregates (140 visite)
Chemistry (ISSN: 1521-3765electronic, 0947-6539linking), 2018 Mar 26; 24(18): 4729-4735.
Impact Factor: 5.476
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Ketola T, Martinez-fernandez L, Improta R, Markovitsi D
* Adenine radicals generated in alternating AT duplexes by direct absorption of low-energy UV radiation (101 visite)
Faraday Discuss (ISSN: 1359-6640print, 1359-6640linking), 2018 Jan 26; N/D: N/D-N/D.
Impact Factor: 4.194
Dettagli Esporta in BibTeX Esporta in EndNote
Martinez Fernandez L, Muñoz-losa A, Esposito L, Improta R
* The optical properties of adenine cation in different oligonucleotides: a PCM/TD‑DFT study (51 visite) (PDF 33 visite)
Theor Chem Acc (ISSN: 1432-881x), 2018; 137(3): N/D-N/D.
Impact Factor: 1.545
Dettagli Esporta in BibTeX Esporta in EndNote
Conti I, Martinez-fernandez L, Esposito L, Hofinger S, Nenov A, Garavelli M, Improta R
* Multiple Electronic and Structural Factors Control Cyclobutane Pyrimidine Dimer and 6-4 Thymine-Thymine Photodimerization in a DNA Duplex (85 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2017 Oct 26; 23(60): 15177-15188.
Impact Factor: 5.16
Dettagli Esporta in BibTeX Esporta in EndNote
Piras L, Avitabile C, D'Andrea LD, Saviano M, Romanelli A
* Detection of oligonucleotides by PNA-peptide conjugates recognizing the biarsenical fluorescein complex FlAsH-EDT2 (119 visite)
Biochem Bioph Res Co (ISSN: 0006-291x), 2017 Sep 15; N/D: N/D-N/D.
Impact Factor: 2.559
Dettagli Esporta in BibTeX Esporta in EndNote
Martinez-fernandez L, Improta R
* Novel adenine/thymine photodimerization channels mapped by PCM/TD-DFT calculations on dApT and TpdA dinucleotides (89 visite)
Photoch Photobio Sci (ISSN: 1474-905x), 2017 Jun 22; 16(8): 1277-1283.
Impact Factor: 2.902
Dettagli Esporta in BibTeX Esporta in EndNote
Martinez-fernandez L, Pepino AJ, Segarra-marti J, Jovaisaite J, Vaya I, Nenov A, Markovitsi D, Gustavsson T, Banyasz A, Garavelli M, Improta R
* Photophysics of Deoxycytidine and 5-Methyldeoxycytidine in Solution: A Comprehensive Picture by Quantum Mechanical Calculations and Femtosecond Fluorescence Spectroscopy (92 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 0002-7863print), 2017 Jun 14; 139(23): 7780-7791.
Impact Factor: 14.357
Dettagli Esporta in BibTeX Esporta in EndNote
Pepino AJ, Segarra-marti J, Nenov A, Improta R, Garavelli M
* Resolving Ultrafast Photoinduced Deactivations in Water-Solvated Pyrimidine Nucleosides (99 visite)
J Phys Chem Lett (ISSN: 1948-7185, 1948-7185electronic), 2017 Apr 20; 8(8): 1777-1783.
Impact Factor: 8.709
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Ketola TM, Munoz-losa A, Rishi S, Adhikary A, Sevilla MD, Martinez-fernandez L, Improta R, Markovitsi D
* UV-Induced Adenine Radicals Induced in DNA A-Tracts: Spectral and Dynamical Characterization (100 visite)
J Phys Chem Lett (ISSN: 1948-7185, 1948-7185electronic), 2016 Oct 06; 7(19): 3949-3953.
Impact Factor: 9.353
Dettagli Esporta in BibTeX Esporta in EndNote
Martinez-fernandez L, Zhang Y, De La Harpe K, Beckstead AA, Kohler B, Improta R
* Photoinduced long-lived charge transfer excited states in AT-DNA strands (73 visite)
Phys Chem Chem Phys (ISSN: 1463-9076, 1463-3907, 1463-9084electronic), 2016 Aug 21; 18(31): 21241-21245.
Impact Factor: 4.123
Dettagli Esporta in BibTeX Esporta in EndNote
Zhang Y, De La Harpe K, Beckstead AA, Martínez-fernández L, Improta R, Kohler B
* Excited-State Dynamics of DNA Duplexes with Different H-Bonding Motifs (165 visite)
J Phys Chem Lett (ISSN: 1948-7185, 1948-7185electronic), 2016; 7(6): 950-954.
Impact Factor: 9.353
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Santoro F, Blancafort L
* Quantum Mechanical Studies on the Photophysics and the Photochemistry of Nucleic Acids and Nucleobases (165 visite)
Chem Rev (ISSN: 0009-2665), 2016; 116(6): 3540-3593.
Impact Factor: 47.928
Dettagli Esporta in BibTeX Esporta in EndNote
Roviello GN, Vicidomini C, Di Gaetano S, Capasso D, Musumeci D, Roviello V
* Solid phase synthesis and RNA-binding activity of an arginine-containing nucleopeptide (186 visite)
Rsc Adv (ISSN: 2046-2069), 2016; 6(17): 14140-14148.
Impact Factor: 3.108
Dettagli Esporta in BibTeX Esporta in EndNote
Zhang Y, de La Harpe K, Beckstead AA, Improta R, Kohler B
* UV-Induced Proton Transfer between DNA Strands (148 visite) (PDF 129 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 0002-7863print), 2015 Jun 10; 137(22): 7059-7062.
Impact Factor: 13.038
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Barone V
* Excited States behavior of nucleobases in solution: insights from computational studies (117 visite)
Top Curr Chem (ISSN: 0340-1022), 2015; 355: 329-357.
Impact Factor: 4.014
Dettagli Esporta in BibTeX Esporta in EndNote
Avitabile C, D'Andrea LD, Romanelli A
* Exploring the dark matter of the human genome using oligonucleotide-based molecules (86 visite)
Future Med Chem (ISSN: 1756-8919, 1756-8919linking, 1756-8927electronic), 2015; 7(13): 1627-1630.
Impact Factor: 3.345
Dettagli Esporta in BibTeX Esporta in EndNote
Musumeci D, Rozza L, Merlino A, Paduano L, Marzo T, Massai L, Messori L, Montesarchio D
* Interaction of anticancer Ru(III) complexes with single stranded and duplex DNA model systems (186 visite)
Dalton T (ISSN: 1477-9226, 1477-9234, 1477-9226linking), 2015; 44(31): 13914-13925.
Impact Factor: 4.177
Dettagli Esporta in BibTeX Esporta in EndNote
Changenet-Barret P, Gustavsson T, Improta R, Markovitsi D
* Ultrafast Excited-State Deactivation of 8-Hydroxy-2′-deoxyguanosine Studied by Femtosecond Fluorescence Spectroscopy and Quantum-Chemical Calculations (141 visite)
J Phys Chem A (ISSN: 1089-5639, 1520-5215electronic), 2015; 119(23): 6131-6139.
Impact Factor: 2.883
Dettagli Esporta in BibTeX Esporta in EndNote
Zhang Y, Dood J, Beckstead AA, Li X-B, Nguyen KV, Burrows CJ, Improta R, Kohler B
* Efficient UV-induced charge separation and recombination in an 8-oxoguanine-containing dinucleotide (152 visite)
P Natl Acad Sci Usa (ISSN: 0027-8424, 1091-6490, 0027-8424print), 2014 Sep 12; 111(32): 11612-11617.
Impact Factor: 9.674
Dettagli Esporta in BibTeX Esporta in EndNote
Esposito L, Banyasz A, Douki T, Perron M, Markovitsi D, Improta R
* Effect of C5-methylation of cytosine on the photoreactivity of DNA: A joint experimental and computational study of TCG trinucleotides (130 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 0002-7863print), 2014 Sep 6; 136(31): 10838-10841.
Impact Factor: 12.113
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R
* Quantum mechanical calculations unveil the structure and properties of the absorbing and emitting excited electronic states of guanine quadruplex (143 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2014 Jun 23; 20(26): 8106-8115.
Impact Factor: 5.731
Dettagli Esporta in BibTeX Esporta in EndNote
Santoro F, Improta R, Fahleson T, Kauczor J, Norman P, Coriani S
* Relative stability of the La and Lb excited states in adenine and guanine: Direct evidence from TD-DFT calculations of MCD spectra (126 visite)
J Phys Chem Lett (ISSN: 1948-7185, 1948-7185electronic), 2014 Jun 5; 5(11): 1806-1811.
Impact Factor: 7.458
Dettagli Esporta in BibTeX Esporta in EndNote
Romanucci V, Milardi D, Campagna T, Gaglione M, Messere A, D'Urso A, Crisafi E, La Rosa C, Zarrelli A, Balzarini J, Di Fabio G
* Synthesis, biophysical characterization and anti-HIV activity of d(TG(3)AG) Quadruplexes bearing hydrophobic tails at the 5 '-end (190 visite)
Bioorg Med Chem (ISSN: 0968-0896, 1464-3391), 2014 Feb 1; 22(3): 960-966.
Impact Factor: 2.793
Dettagli Esporta in BibTeX Esporta in EndNote
Malgieri G, Palmieri M, Esposito S, Maione V, Russo L, Baglivo I, De Paola I, Milardi D, Diana D, Zaccaro L, Pedone PV, Fattorusso R, Isernia C
* Zinc To Cadmium Replacement In The Prokaryotic Zinc-Finger Domain (208 visite)
Metallomics (ISSN: 1756-591x, 1756-5901, 1756-591xelectronic), 2013 Dec 18; 6(1): 96-104.
Impact Factor: 3.978
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Gustavsson T, Onidas D, Changenet-Barret P, Markovitsi D, Improta R
* Multi-pathway excited state relaxation of adenine oligomers in aqueous solution: A joint theoretical and experimental study (124 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2013 Mar; 19(11): 3762-3774.
Impact Factor: 5.696
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R
* Photophysics and photochemistry of thymine deoxy-dinucleotide in water: A PCM/TD-DFT quantum mechanical study (137 visite)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic), 2012 Dec 13; 116(49): 14261-14274.
Impact Factor: 3.607
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Douki T, Improta R, Gustavsson T, Onidas D, Vaya I, Perron M, Markovitsi D
* Electronic excited states responsible for dimer formation upon UV absorption directly by thymine strands: Joint experimental and theoretical study (181 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2012 Sep 12; 134(36): 14834-14845.
Impact Factor: 10.677
Dettagli Esporta in BibTeX Esporta in EndNote
Hua Y, Changenet-Barret P, Improta R, Vaya I, Gustavsson T, Kotlyar AB, Zikich D, Sket P, Plavec J, Markovitsi D
* Cation effect on the electronic excited states of guanine nanostructures studied by time-resolved fluorescence spectroscopy (215 visite)
J Phys Chem C (ISSN: 1932-7447), 2012 Jul 12; 116(27): 14682-14689.
Impact Factor: 4.814
Dettagli Esporta in BibTeX Esporta in EndNote
Musumeci D, Oliviero G, Roviello GN, Bucci EM, Piccialli G
* G-quadruplex-forming oligonucleotide conjugated to magnetic nanoparticles: Synthesis, characterization, and enzymatic stability assays (204 visite)
Bioconjug Chem (ISSN: 1043-1802, 1520-4812, 1520-4812electronic), 2012 Mar 21; 23(3): 382-391.
Impact Factor: 4.58
Dettagli Esporta in BibTeX Esporta in EndNote
Biemann L, Kovalenko SA, Kleinermanns K, Mahrwald R, Markert M, Improta R
* Excited state proton transfer is not involved in the ultrafast deactivation of Guanine-cytosine pair in solution (123 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2011 Dec 14; 133(49): 19664-19667.
Impact Factor: 9.907
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Barone V
* Interplay between "neutral" and "charge-transfer" excimers rules the excited state decay in adenine-rich polynucleotides (102 visite)
Angew Chem Int Ed (ISSN: 1433-7851, 1521-3773electronic), 2011 Dec 9; 50(50): 12016-12019.
Impact Factor: 13.455
Dettagli Esporta in BibTeX Esporta in EndNote
Picconi D, Barone V, Lami A, Santoro F, Improta R
* The Interplay between ππ*/nπ* excited states in gas-phase thymine: A quantum dynamical study (118 visite)
Chemphyschem (ISSN: 1439-4235, 1439-7641, 1439-7641electronic), 2011 Jul 11; 12(10): 1957-1968.
Impact Factor: 3.412
Dettagli Esporta in BibTeX Esporta in EndNote
Banyasz A, Karpati S, Mercier Y, Reguero M, Gustavsson T, Markovitsi D, Improta R
* The peculiar spectral properties of amino-substituted uracils: A combined theoretical and experimental study (146 visite)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic), 2010 Oct 7; 114(39): 12708-12719.
Impact Factor: 3.603
Dettagli Esporta in BibTeX Esporta in EndNote
Changenet-Barret P, Emanuele E, Gustavsson T, Improta R, Kotlyar AB, Markovitsi D, Vaya I, Zakrzewska K, Zikich D
* Optical properties of guanine nanowires: Experimental and theoretical study (120 visite)
J Phys Chem C (ISSN: 1932-7447), 2010 Sep 2; 114(34): 14339-14346.
Impact Factor: 4.524
Dettagli Esporta in BibTeX Esporta in EndNote
Gustavsson T, Improta R, Markovitsi D
DNA/RNA: Building blocks of life under UV irradiation (122 visite)
J Phys Chem Lett (ISSN: 1948-7185, 1948-7185electronic, 1948-7185linking), 2010 Jul 1; 1(13): 2025-2030.
Impact Factor: 6.687
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Santoro F, Barone V, Lami A
* Vibronic model for the quantum dynamical study of the competition between bright and charge-transfer excited states in single-strand polynucleotides: the adenine dimer case (119 visite)
J Phys Chem A (ISSN: 1089-5639, 1520-5215electronic, 1089-5639linking), 2009 Dec 31; 113(52): 15346-15354.
Impact Factor: 2.899
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Barone V
* PCM/TD-DFT study of the two lowest excited states of uracil derivatives in solution: The effect of the functional and of the cavity model (127 visite)
J Mol Struct Theochem (ISSN: 0166-1280), 2009 Nov 30; 914(1-3): 87-93.
Impact Factor: 1.216
Dettagli Esporta in BibTeX Esporta in EndNote
Karunakaran V, Kleinermanns K, Improta R, Kovalenko SA
* Photoinduced dynamics of guanosine monophosphate in water from broad-band transient absorption spectroscopy and quantum-chemical calculations (146 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2009; 131(16): 5839-5850.
Impact Factor: 8.58
Dettagli Esporta in BibTeX Esporta in EndNote
Santoro F, Barone V, Improta R
* The Excited States Decay Of The A-T Dna: A Pcm/Td-Dft Study In Aqueous Solution Of The (9-Methyl-Adenine) 2 (1-Methyl-Thymine) 2 Stacked Tetramer (114 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2009; 131(42): 15232-15245.
Impact Factor: 8.58
Dettagli Esporta in BibTeX Esporta in EndNote
Mercier Y, Santoro F, Reguero M, Improta R
* The decay from the dark nπ* excited state in uracil: An integrated CASPT2/CASSCF and PCM/TD-DFT study in the gas phase and in water (138 visite)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic), 2008 Sep 4; 112(35): 10769-10772.
Impact Factor: 4.189
Dettagli Esporta in BibTeX Esporta in EndNote
Roviello GN, Musumeci D, Bucci EM, Castiglione M, Cesarani A, Pedone C, Piccialli G
* Evidences for complex formation between l-dabPNA and aegPNA (152 visite)
Bioorg Med Chem Lett (ISSN: 0960-894x, 1464-3405, 1464-3405electronic), 2008 Sep 1; 18(17): 4757-4760.
Impact Factor: 2.531
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Barone V
* The excited states of adenine and thymine nucleoside and nucleotide in aqueous solution: A comparative study by time-dependent DFT calculations (121 visite)
Theor Chem Acc (ISSN: 1432-881x), 2008 Jul; 120(4-6): 491-497.
Impact Factor: 2.37
Dettagli Esporta in BibTeX Esporta in EndNote
Gustavsson T, Bányász A, Sarkar N, Markovitsi D, Improta R
* Assessing solvent effects on the singlet excited state lifetime of uracil derivatives: A femtosecond fluorescence upconversion study in alcohols and D2O (114 visite)
Chem Phys (ISSN: 0301-0104), 2008 Jun 23; 350(1-3): 186-192.
Impact Factor: 1.961
Dettagli Esporta in BibTeX Esporta in EndNote
Gustavsson T, Banyasz A, Sarkar N, Markovitsi D, Improta R
* Statin: New life for an old drug (157 visite)
Pharmacol Res Academic Press, 2008 Jun 23; 350(1-3): 1-2.
Impact Factor: 3.976
Dettagli Esporta in BibTeX Esporta in EndNote
Santoro F, Barone V, Improta R
* Can TD-DFT calculations accurately describe the excited states behavior of stacked nucleobases? The cytosine dimer as a test case (129 visite)
J Comput Chem (ISSN: 0192-8651, 1096-987xelectronic, 0192-8651linking), 2008 Apr 30; 29(6): 957-964.
Impact Factor: 3.39
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R
The Excited States Of Pi-Stacked 9-Methyl Adenine Oligomers: A Td-Dft Study In Aqueous Solution (103 visite)
Physical Chemistry Chemical Physics, 2008; 10: 2656-2664.
Impact Factor: 2.028
Dettagli Esporta in BibTeX Esporta in EndNote
Santoro F, Barone V, Benzi C, Improta R
* Excited state properties of sizable molecules in solution: From structure to reactivity (136 visite)
Theor Chem Acc (ISSN: 1432-881x), 2007 May; 117(5-6): 1073-1084.
Impact Factor: 2.537
Dettagli Esporta in BibTeX Esporta in EndNote
Bonomo RP, Pappalardo G, Rizzarelli E, Santoro AM, Tabbì G, Vagliasindi LI
* Nitrogen oxide interaction with copper complexes formed by small peptides belonging to the prion protein octa-repeat region (237 visite)
Dalton T (ISSN: 1477-9226, 1477-9234, 1477-9234electronic), 2007 Apr 14; (14): 1400-1408.
Impact Factor: 3.212
Dettagli Esporta in BibTeX Esporta in EndNote
Bucci EM, Valente M, Musumeci D, Sapio R, Anrò V, Roviello GN, Moccia M
* ODN-based drugs for targeting of extracellular proteins (142 visite)
Nucleosides Nucleotides Nucleic Acids (ISSN: 1525-7770), 2007; 26(8-9): 1047-1050.
Impact Factor: 0.723
Dettagli Esporta in BibTeX Esporta in EndNote
Moccia M, Musumeci D, Valente M, Roviello GN, Sapio R, Pedone C, Bucci EM
* Thermodynamic studies on PNA and PNA/DNA dendrimer formation (117 visite)
Nucleosides Nucleotides Nucleic Acids (ISSN: 1525-7770), 2007; 26(8-9): 1173-1176.
Impact Factor: 0.723
Dettagli Esporta in BibTeX Esporta in EndNote
Santoro F, Barone V, Gustavsson T, Improta R
* Solvent effect on the singlet excited-state lifetimes of nucleic acid bases: A computational study of 5-fluorouracil and uracil in acetonitrile and water (121 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2006 Dec 20; 128(50): 16312-16322.
Impact Factor: 7.696
Dettagli Esporta in BibTeX Esporta in EndNote
Improta R, Barone V, Scalmani G, Frisch MJ
* A state-specific polarizable continuum model time dependent density functional theory method for excited state calculations in solution (149 visite)
J Chem Phys (ISSN: 0021-9606, 0897-690online), 2006 Sep 7; 125(5): N/D-N/D.
Impact Factor: 3.166
Dettagli Esporta in BibTeX Esporta in EndNote
Vogt G, Nuernberger P, Gerber G, Improta R, Santoro F, Nuernberger P, Vogt G, Gerber G, Improta R, Santoro F
* Femtosecond study on the isomerization dynamics of NK88. II. Excited-state dynamics (192 visite)
J Chem Phys (ISSN: 0021-9606, 0897-690online), 2006 Jul 28; 125(4): 44512-44512.
Impact Factor: 3.166
Dettagli Esporta in BibTeX Esporta in EndNote
Gustavsson T, Sarkar N, Lazzarotto E, Markovitsi D, Barone V, Improta R
* Solvent effect on the singlet excited-state dynamics of 5-fluorouracil in acetonitrile as compared with water (164 visite)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic), 2006 Jul 6; 110(26): 12843-12847.
Impact Factor: 4.115
Dettagli Esporta in BibTeX Esporta in EndNote
Borgatti M, Finotti A, Romanelli A, Saviano M, Bianchi N, Lampronti I, Lambertini E, Penolazzi L, Nastruzzi C, Mischiati C, Piva R, Pedone C, Gambari R
* Peptide nucleic acids (PNA)-DNA chimeras targeting transcription factors as a tool to modify gene expression (178 visite)
Curr Drug Targets (ISSN: 1389-4501), 2004 Nov; 5(8): 735-744.
Impact Factor: 4.104
Dettagli Esporta in BibTeX Esporta in EndNote
Mischiati C, Sereni A, Finotti A, Breda L, Cortesi R, Nastruzzi C, Romanelli A, Saviano M, Bianchi N, Pedone C, Borgatti M, Gambari R
* Complexation to cationic microspheres of double-stranded peptide nucleic acid-DNA chimeras exhibiting decoy activity (135 visite)
Journal Of Biomedical Science (ISSN: 1021-7770), 2004 Sep; 11(5): 697-704.
Impact Factor: 1.567
Dettagli Esporta in BibTeX Esporta in EndNote
Caricasole A, Copani A, Caraci F, Aronica E, Rozemuller AJ, Caruso A, Storto M, Gaviraghi G, Terstappen GC, Nicoletti F
* Induction of Dickkopf-1, a negative modulator of the Wnt pathway, is associated with neuronal degeneration in Alzheimer's brain (238 visite)
J Neurosci (ISSN: 0270-6474, 0361-803x, 1529-2401), 2004 Jun 30; 24(26): 6021-6027.
Impact Factor: 2.384
Dettagli Esporta in BibTeX Esporta in EndNote
Barone V, Formaggio F, Improta R, Polo F, Maran F
* Electron transfer to and conformational preferences of Aib oligo-peptides (210 visite)
Proc Electrochem Soc, 2004; 10: 29-32.
Impact Factor: 0
Dettagli Esporta in BibTeX Esporta in EndNote
Vitagliano L, Masullo M, Sica F, Zagari A, Bocchini V
* The crystal structure of Sulfolobus solfataricus elongation factor 1α in complex with GDP reveals novel features in nucleotide binding and exchange (150 visite)
Embo J (ISSN: 0261-4189), 2001 Oct 1; 20(19): 5305-5311.
Impact Factor: 12.459
Dettagli Esporta in BibTeX Esporta in EndNote
Zannetti A, Del Vecchio S, Carriero MV, Fonti R, Franco P, Botti G, D'Aiuto G, Stoppelli MP, Salvatore M
Coordinate up-regulation of Sp1 DNA-binding activity and urokinase receptor expression in breast carcinoma (212 visite)
Cancer Res (ISSN: 0008-5472, 1538-7445, 1538-7445electronic), 2000 Mar 15; 60(6): 1546-1551.
Impact Factor: 8.46
Dettagli Esporta in BibTeX Esporta in EndNote
De Napoli L, De Luca S, Di Fabio G, Messere A, Montesarchio D, Morelli G, Piccialli G, Tesauro D
A facile solid-phase strategy for the synthesis of oligonucleotide- tetraphenylporphyrin conjugates (141 visite)
European Journal Of Organic Chemistry (ISSN: 1434-193x), 2000; (6): 1013-1018.
Impact Factor: 2.15
Dettagli Esporta in BibTeX Esporta in EndNote
Sica F, Adinolfi S, Berisio R, De Lorenzo C, Mazzarella L, Piccoli R, Vitagliano L, Zagari A
Crystallization of multiple forms of bovine seminal ribonuclease in the liganded and unliganded state (141 visite)
J Cryst Growth (ISSN: 0022-0248), 1999; 196(2-4): 305-312.
Impact Factor: 1.492
Dettagli Esporta in BibTeX Esporta in EndNote
Adinolfi S, Piccoli R, Sica F, Mazzarella L
BS-RNase tetramers: An example of domain-swapped oligomers (157 visite)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 1996 Dec 2; 398(2-3): 326-332.
Impact Factor: 3.504
Dettagli Esporta in BibTeX Esporta in EndNote
Mastruzzo L, Woisard A, Ma DD, Rizzarelli E, Favre A, Le Doan T
TARGETED PHOTOCHEMICAL MODIFICATION OF HIV-DERIVED OLIGORIBONUCLEOTIDES BY ANTISENSE OLIGODEOXYNUCLEOTIDES LINKED TO PORPHYRINS (143 visite)
Photochem Photobiol (ISSN: 0031-8655), 1994 Oct; 60(4): 316-322.
Impact Factor: 2.426
Dettagli Esporta in BibTeX Esporta in EndNote
Bustamante C, Gurrieri S, Pasternack RF, Purrello R, Rizzarelli E
Interaction of water-soluble porphyrins with single- and double-stranded polyribonucleotides (119 visite)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 1994 Sep; 34(8): 1099-1104.
Impact Factor: 2.425
Dettagli Esporta in BibTeX Esporta in EndNote
Maglione D, Guerriero V, Viglietto G, Ferraro MG, Aprelikova O, Alitalo K, Del Vecchio S, Lei KJ, Chou JY, Persico MG
Two alternative mRNAs coding for the angiogenic factor, placenta growth factor (PlGF), are transcribed from a single gene of chromosome 14 (159 visite)
Oncogene (ISSN: 0950-9232, 1476-5594), 1993; 8(4): 925-931.
Impact Factor: 6.772
Dettagli Esporta in BibTeX Esporta in EndNote
70 Records (68 escludendo Abstract e Conferenze).
Impact factor totale: 388.347 (382.015 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 397.707 (391.423 escludendo Abstract e Conferenze).
Impact factor totale: 388.347 (382.015 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 397.707 (391.423 escludendo Abstract e Conferenze).
Esporta in BibTeX Esporta in EndNote
Ultima modifica di Gennaro Angrisano in data Thursday 01 October 2015, 17:34:41
182 visite. Ultima visita in data Sunday 08 December 2019, 3:02:36
ibb.cnr.it