NMR structure of the single QALGGH zinc finger domain from the Arabidopsis thaliana SUPERMAN protein (329 views visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Mar 3; 4(2-3): 171-180.
Export to Esporta in BibTeX Export to Esporta in EndNote
Paper type Tipo di articolo: Journal Article,
Impact factor: 3.992, 5-year impact factor Impact factor a 5 anni: 3.307
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-0037416495&partnerID=40&md5=edc7651ee12bc9ce74c013343537f1ee
Keywords Parole chiave: Dna Recognition, Nmr Spectroscopy, Structure Elucidation, Superman, Zinc Finger Domain, Alpha Amino Acid, Vegetable Protein, Zinc Finger Protein, Amino Acid Sequence, Arabidopsis, Article, Crystal Structure, Dna Binding, Ligand Binding, Nonhuman, Nuclear Magnetic Resonance Spectroscopy, Peptide Synthesis, Plant, Priority Journal, Protein Structure, Reversed Phase High Performance Liquid Chromatography, Structure Analysis, Three Dimensional Imaging, Ultraviolet Spectrophotometry, Arabidopsis Proteins, Dna-Binding Proteins, Molecular Structure, Peptide Biosynthesis, Protein Conformation, Transcription Factors, Animalia, Arabidopsis Thaliana, Embryophyta, Eukaryota,
Affiliations Affiliazioni:
*** IBB - CNR ***
Dipartimento di Scienze Ambientali, Seconda Universita di Napoli, 81100 Caserta, Italy
Dipartimento di Chimica Biologica, Ist. Biostrutture/Bioimmagini - CNR, Universita di Napoli Federico II, 80134 Napoli, Italy
Bioindustry Park del Canavese, 10010 Colleretto Giacosa, Torino, Italy
References Riferimenti:
Berg, J.M., (1995) Acc. Chem. Res., 28, pp. 14-1
Berg, J.M., Godwin, H.A., (1997) Annu. Rev. Biophys. Biomol. Struct., 26, pp. 357-371
Schwabe, J.W.R., Klug, A., (1994) Nat. Struct. Biol., 1, pp. 345-349
Hanas, J.S., Hazuda, D.J., Bogenhagen, D.F., Wu, F.Y.-H., Wu, C.-W., (1983) J. Biol. Chem., 258, pp. 14120-14125
Miller, J., McLachlan, A.D., Klug, A., (1985) EMBO J., 4, pp. 1609-1614
Wolfe, S.A., Nekludova, L., Pabo, C.O., (2000) Annu. Rev. Biophys. Biomol. Struct., 29, pp. 183-212
Foster, M.P., Wuttke, D.S., Radhakrishnan, I., Case, D.A., Gottesfeld, J.M., Wright, P.E., (1997) Nat. Struct. Biol., 4, pp. 605-608
Pedone, P.V., Ghirlando, R., Clore, G.M., Gronenborn, A., Felsenfeld, G., Omichinski, J., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 2822-2826
Omichinski, J.G., Pedone, P.V., Felsenfeld, G., Gronenborn, A., Clore, G.M., (1997) Nat. Struct. Biol., 4, pp. 122-132
Takatsuji, H., Mori, M., Benfey, P.N., Ren, L., Chua, N.-H., (1992) EMBO J., 71, pp. 241-249
Takatsuji, H., (1999) Plant Mol. Biol., 39, pp. 1073-1078
Kubo, K., Sakamoto, A., Kobuyashi, A., Rybka, Z., Kanno, Y., Nakagawa, H., Nishino, T., Takatsuji, H., (1998) Nucleic Acids Res., 26, pp. 608-616
Sakai, H., Medrano, L.J., Meyerowitz, E.M., (1995) Nature, 378, pp. 199-203
Gerber, H.P., Seipel, K., Georgiev, O., Hofferer, M., Hug, M., Rusconi, S., Schaffner, W., (1994) Science, 263, pp. 808-811
Soeller, W.C., Oh, C.E., Kornberg, T.B., (1993) Mol. Cell. Biol., 13, pp. 7961-7970
Dathan, N., Zaccaro, L., Esposito, S., Isernia, C., Omichinski, J.G., Riccio, A., Pedone, C., Pedone, P.V., (2002) Nucleic Acids Res., 30, pp. 4945-4951
Corpet, F., (1988) Nucleic Acids Res., 16, pp. 10881-10890
Bertini, I., Luchinat, C., (1984) Adv. Inorg. Chem., 6, pp. 71-111
Wisz, M.S., Garrett, C.Z., Hellinga, H.W., (1998) Biochemistry, 37, pp. 8269-8277
Roesijadi, G., Bogumil, R., Vašák, M., Kägi, H.R., (1998) J. Biol. Chem., 273, pp. 17425-17432
Berg, J.M., Merkle, D.L., (1989) J. Am. Chem. Soc., 111, pp. 3759-3761
Wüthrich, K., (1986) NMR of Proteins and Nucleic Acids, , Wiley, New York
Kumar, A., Ernst, R.R., Wüthrich, K., (1980) Biochem. Biophys. Res. Commun., 95, pp. 1-6
Rance, M., Sorensen, O.W., Bodenhausen, G., Wagner, G., Ernst, R.R., Wüthrich, K., (1983) Biochem. Biophys. Res. Commun., 117, pp. 479-485
Griesinger, C., Otting, G., Wüthrich, K., Ernst, R.R., (1988) J. Am. Chem. Soc., 110, pp. 7870-7872
Lee, M.S., Mortishire-Smith, R.J., Wright, P., (1992) FEBS Lett., 309, pp. 29-32
Barbato, G., Cicero, D.O., Bianchi, E., Pessi, A., Bazzo, R., (1996) J. Biomol. NMR, pp. 36-48
Güntert, P., Mumenthaler, C., Wüthrich, K., (1997) J. Mol. Biol., 273, pp. 283-298
Laskowski, R.A., Rullmannn, J.A., MacArthur, M.W., Kaptein, R., Thornton, J.M., (1996) J. Biomol. NMR, 8, pp. 477-486
Laity, J.H., Lee, B.M., Wright, P., (2001) Curr. Opin. Struct. Biol., 11, pp. 39-46
Yoshioka, K., Fukushima, S., Yamazaki, T., Yoshida, M., Takatsuji, H., (2001) J. Biol. Chem., 276, pp. 35802-35807
Pabo, O.C., Peisach, E., Grant, R.A., (2001) Annu. Rev. Biochem., 70, pp. 313-340
Choo, Y., Klug, A., (1997) Curr. Opin. Struct. Biol., 7, pp. 117-125
Takatsuji, H., (1996) Biochem. Biophys. Res. Commun., 224, pp. 219-213
Coste, J., Le-Nguyen, D., Castro, B., (1990) Tethaedron Lett., 31, pp. 201-208
Carpino, L.A., (1993) J. Am. Chem. Soc., 115, pp. 4397-4398
Riddles, P.W., Blakeley, R.L., Zerner, B., (1983) Methods Enzymol., 91, pp. 49-60
Pace, C.N., Vajdos, F., Fee, L., Grimsley, G., Gray, T., (1995) Protein Sci., 4, pp. 2411-2423
Piotto, M., Saudek, V., Sklenár, V., (1992) J. Biomol. NMR, 2, pp. 661-665
Güntert, P., Dötsch, V., Wider, G., (1992) J. Biomol. NMR, 2, pp. 619-629
Bartels, C., Xia, T., Billeter, M., Wüthrich, K., (1995) J. Biomol. NMR, 5, pp. 1-10
Van Gunsteren, W.F., Billeter, S.R., Eising, A.A., Hunenberger, P.H., Kruger, P., Mark, A.E., Scott, W.R.P., Tironi, I.G., (1996) Biomolecular Simulation: The Gromos96 Manual and User Guide, , BIOMOs b.v. Zürich, Groningen, The Netherlands
Arfken, G., (1985) Mathematical Methods for Physicists, pp. 428-436. , Academic Press, Orlando USA
Koradi, R., Billeter, M., Wüthrich, K., (1996) J. Mol. Graphics, 14, pp. 29-32
Fairall, L., Schwabe, J.W.R., Chapman, L., Finch, J.T., Rhodes, D., (1993) Nature, 366, pp. 483-487
Bowres, M.P., Schaufler, L.E., Klevit, R.E., (1999) Nat. Struct. Biol., 6, pp. 478-485
Omichinski, J.G., Clore, G.M., Appella, E., Sakaguchi, K., Gronenborn, A.M., (1990) Biochemistry, 29, pp. 9324-9334
Eirod-Erickson, M., Rould, M.A., Nekludova, L., Pabo, C.O., (1996) Structure, 4, pp. 1171-1180
Lee, M.S., Gippert, G.R., Soman, K.V., Case, D.A., Wright, P.E., (1989) Science, 245, pp. 635-637
Houbaviy, H.B., Husheva, A., Shenk, T., Burley, S.K., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 13577-13582
Kochoyan, M., Havel, T.F., Nguyen, D.T., Dahl, C.E., Keutmann, H.T., Weiss, M.A., (1991) Biochemistry, 30, pp. 3371-3386
Berg, J. M., (1995) Acc. Chem. Res., 28, pp. 14-1
Berg, J. M., Godwin, H. A., (1997) Annu. Rev. Biophys. Biomol. Struct., 26, pp. 357-371
Schwabe, J. W. R., Klug, A., (1994) Nat. Struct. Biol., 1, pp. 345-349
Hanas, J. S., Hazuda, D. J., Bogenhagen, D. F., Wu, F. Y. -H., Wu, C. -W., (1983) J. Biol. Chem., 258, pp. 14120-14125
Wolfe, S. A., Nekludova, L., Pabo, C. O., (2000) Annu. Rev. Biophys. Biomol. Struct., 29, pp. 183-212
Foster, M. P., Wuttke, D. S., Radhakrishnan, I., Case, D. A., Gottesfeld, J. M., Wright, P. E., (1997) Nat. Struct. Biol., 4, pp. 605-608
Pedone, P. V., Ghirlando, R., Clore, G. M., Gronenborn, A., Felsenfeld, G., Omichinski, J., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 2822-2826
Omichinski, J. G., Pedone, P. V., Felsenfeld, G., Gronenborn, A., Clore, G. M., (1997) Nat. Struct. Biol., 4, pp. 122-132
Gerber, H. P., Seipel, K., Georgiev, O., Hofferer, M., Hug, M., Rusconi, S., Schaffner, W., (1994) Science, 263, pp. 808-811
Soeller, W. C., Oh, C. E., Kornberg, T. B., (1993) Mol. Cell. Biol., 13, pp. 7961-7970
Wisz, M. S., Garrett, C. Z., Hellinga, H. W., (1998) Biochemistry, 37, pp. 8269-8277
Berg, J. M., Merkle, D. L., (1989) J. Am. Chem. Soc., 111, pp. 3759-3761
W thrich, K., (1986) NMR of Proteins and Nucleic Acids, , Wiley, New York
Lee, M. S., Mortishire-Smith, R. J., Wright, P., (1992) FEBS Lett., 309, pp. 29-32
G ntert, P., Mumenthaler, C., W thrich, K., (1997) J. Mol. Biol., 273, pp. 283-298
Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., Thornton, J. M., (1996) J. Biomol. NMR, 8, pp. 477-486
Laity, J. H., Lee, B. M., Wright, P., (2001) Curr. Opin. Struct. Biol., 11, pp. 39-46
Pabo, O. C., Peisach, E., Grant, R. A., (2001) Annu. Rev. Biochem., 70, pp. 313-340
Carpino, L. A., (1993) J. Am. Chem. Soc., 115, pp. 4397-4398
Riddles, P. W., Blakeley, R. L., Zerner, B., (1983) Methods Enzymol., 91, pp. 49-60
Pace, C. N., Vajdos, F., Fee, L., Grimsley, G., Gray, T., (1995) Protein Sci., 4, pp. 2411-2423
G ntert, P., D tsch, V., Wider, G., (1992) J. Biomol. NMR, 2, pp. 619-629
Van Gunsteren, W. F., Billeter, S. R., Eising, A. A., Hunenberger, P. H., Kruger, P., Mark, A. E., Scott, W. R. P., Tironi, I. G., (1996) Biomolecular Simulation: The Gromos96 Manual and User Guide, , BIOMOs b. v. Z rich, Groningen, The Netherlands
Bowres, M. P., Schaufler, L. E., Klevit, R. E., (1999) Nat. Struct. Biol., 6, pp. 478-485
Omichinski, J. G., Clore, G. M., Appella, E., Sakaguchi, K., Gronenborn, A. M., (1990) Biochemistry, 29, pp. 9324-9334
Lee, M. S., Gippert, G. R., Soman, K. V., Case, D. A., Wright, P. E., (1989) Science, 245, pp. 635-637
Houbaviy, H. B., Husheva, A., Shenk, T., Burley, S. K., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 13577-13582
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Mar 3; 4(2-3): 171-180.
Export to Esporta in BibTeX Export to Esporta in EndNote
Paper type Tipo di articolo: Journal Article,
Impact factor: 3.992, 5-year impact factor Impact factor a 5 anni: 3.307
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-0037416495&partnerID=40&md5=edc7651ee12bc9ce74c013343537f1ee
Keywords Parole chiave: Dna Recognition, Nmr Spectroscopy, Structure Elucidation, Superman, Zinc Finger Domain, Alpha Amino Acid, Vegetable Protein, Zinc Finger Protein, Amino Acid Sequence, Arabidopsis, Article, Crystal Structure, Dna Binding, Ligand Binding, Nonhuman, Nuclear Magnetic Resonance Spectroscopy, Peptide Synthesis, Plant, Priority Journal, Protein Structure, Reversed Phase High Performance Liquid Chromatography, Structure Analysis, Three Dimensional Imaging, Ultraviolet Spectrophotometry, Arabidopsis Proteins, Dna-Binding Proteins, Molecular Structure, Peptide Biosynthesis, Protein Conformation, Transcription Factors, Animalia, Arabidopsis Thaliana, Embryophyta, Eukaryota,
Affiliations Affiliazioni:
*** IBB - CNR ***
Dipartimento di Scienze Ambientali, Seconda Universita di Napoli, 81100 Caserta, Italy
Dipartimento di Chimica Biologica, Ist. Biostrutture/Bioimmagini - CNR, Universita di Napoli Federico II, 80134 Napoli, Italy
Bioindustry Park del Canavese, 10010 Colleretto Giacosa, Torino, Italy
References Riferimenti:
Berg, J.M., (1995) Acc. Chem. Res., 28, pp. 14-1
Berg, J.M., Godwin, H.A., (1997) Annu. Rev. Biophys. Biomol. Struct., 26, pp. 357-371
Schwabe, J.W.R., Klug, A., (1994) Nat. Struct. Biol., 1, pp. 345-349
Hanas, J.S., Hazuda, D.J., Bogenhagen, D.F., Wu, F.Y.-H., Wu, C.-W., (1983) J. Biol. Chem., 258, pp. 14120-14125
Miller, J., McLachlan, A.D., Klug, A., (1985) EMBO J., 4, pp. 1609-1614
Wolfe, S.A., Nekludova, L., Pabo, C.O., (2000) Annu. Rev. Biophys. Biomol. Struct., 29, pp. 183-212
Foster, M.P., Wuttke, D.S., Radhakrishnan, I., Case, D.A., Gottesfeld, J.M., Wright, P.E., (1997) Nat. Struct. Biol., 4, pp. 605-608
Pedone, P.V., Ghirlando, R., Clore, G.M., Gronenborn, A., Felsenfeld, G., Omichinski, J., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 2822-2826
Omichinski, J.G., Pedone, P.V., Felsenfeld, G., Gronenborn, A., Clore, G.M., (1997) Nat. Struct. Biol., 4, pp. 122-132
Takatsuji, H., Mori, M., Benfey, P.N., Ren, L., Chua, N.-H., (1992) EMBO J., 71, pp. 241-249
Takatsuji, H., (1999) Plant Mol. Biol., 39, pp. 1073-1078
Kubo, K., Sakamoto, A., Kobuyashi, A., Rybka, Z., Kanno, Y., Nakagawa, H., Nishino, T., Takatsuji, H., (1998) Nucleic Acids Res., 26, pp. 608-616
Sakai, H., Medrano, L.J., Meyerowitz, E.M., (1995) Nature, 378, pp. 199-203
Gerber, H.P., Seipel, K., Georgiev, O., Hofferer, M., Hug, M., Rusconi, S., Schaffner, W., (1994) Science, 263, pp. 808-811
Soeller, W.C., Oh, C.E., Kornberg, T.B., (1993) Mol. Cell. Biol., 13, pp. 7961-7970
Dathan, N., Zaccaro, L., Esposito, S., Isernia, C., Omichinski, J.G., Riccio, A., Pedone, C., Pedone, P.V., (2002) Nucleic Acids Res., 30, pp. 4945-4951
Corpet, F., (1988) Nucleic Acids Res., 16, pp. 10881-10890
Bertini, I., Luchinat, C., (1984) Adv. Inorg. Chem., 6, pp. 71-111
Wisz, M.S., Garrett, C.Z., Hellinga, H.W., (1998) Biochemistry, 37, pp. 8269-8277
Roesijadi, G., Bogumil, R., Vašák, M., Kägi, H.R., (1998) J. Biol. Chem., 273, pp. 17425-17432
Berg, J.M., Merkle, D.L., (1989) J. Am. Chem. Soc., 111, pp. 3759-3761
Wüthrich, K., (1986) NMR of Proteins and Nucleic Acids, , Wiley, New York
Kumar, A., Ernst, R.R., Wüthrich, K., (1980) Biochem. Biophys. Res. Commun., 95, pp. 1-6
Rance, M., Sorensen, O.W., Bodenhausen, G., Wagner, G., Ernst, R.R., Wüthrich, K., (1983) Biochem. Biophys. Res. Commun., 117, pp. 479-485
Griesinger, C., Otting, G., Wüthrich, K., Ernst, R.R., (1988) J. Am. Chem. Soc., 110, pp. 7870-7872
Lee, M.S., Mortishire-Smith, R.J., Wright, P., (1992) FEBS Lett., 309, pp. 29-32
Barbato, G., Cicero, D.O., Bianchi, E., Pessi, A., Bazzo, R., (1996) J. Biomol. NMR, pp. 36-48
Güntert, P., Mumenthaler, C., Wüthrich, K., (1997) J. Mol. Biol., 273, pp. 283-298
Laskowski, R.A., Rullmannn, J.A., MacArthur, M.W., Kaptein, R., Thornton, J.M., (1996) J. Biomol. NMR, 8, pp. 477-486
Laity, J.H., Lee, B.M., Wright, P., (2001) Curr. Opin. Struct. Biol., 11, pp. 39-46
Yoshioka, K., Fukushima, S., Yamazaki, T., Yoshida, M., Takatsuji, H., (2001) J. Biol. Chem., 276, pp. 35802-35807
Pabo, O.C., Peisach, E., Grant, R.A., (2001) Annu. Rev. Biochem., 70, pp. 313-340
Choo, Y., Klug, A., (1997) Curr. Opin. Struct. Biol., 7, pp. 117-125
Takatsuji, H., (1996) Biochem. Biophys. Res. Commun., 224, pp. 219-213
Coste, J., Le-Nguyen, D., Castro, B., (1990) Tethaedron Lett., 31, pp. 201-208
Carpino, L.A., (1993) J. Am. Chem. Soc., 115, pp. 4397-4398
Riddles, P.W., Blakeley, R.L., Zerner, B., (1983) Methods Enzymol., 91, pp. 49-60
Pace, C.N., Vajdos, F., Fee, L., Grimsley, G., Gray, T., (1995) Protein Sci., 4, pp. 2411-2423
Piotto, M., Saudek, V., Sklenár, V., (1992) J. Biomol. NMR, 2, pp. 661-665
Güntert, P., Dötsch, V., Wider, G., (1992) J. Biomol. NMR, 2, pp. 619-629
Bartels, C., Xia, T., Billeter, M., Wüthrich, K., (1995) J. Biomol. NMR, 5, pp. 1-10
Van Gunsteren, W.F., Billeter, S.R., Eising, A.A., Hunenberger, P.H., Kruger, P., Mark, A.E., Scott, W.R.P., Tironi, I.G., (1996) Biomolecular Simulation: The Gromos96 Manual and User Guide, , BIOMOs b.v. Zürich, Groningen, The Netherlands
Arfken, G., (1985) Mathematical Methods for Physicists, pp. 428-436. , Academic Press, Orlando USA
Koradi, R., Billeter, M., Wüthrich, K., (1996) J. Mol. Graphics, 14, pp. 29-32
Fairall, L., Schwabe, J.W.R., Chapman, L., Finch, J.T., Rhodes, D., (1993) Nature, 366, pp. 483-487
Bowres, M.P., Schaufler, L.E., Klevit, R.E., (1999) Nat. Struct. Biol., 6, pp. 478-485
Omichinski, J.G., Clore, G.M., Appella, E., Sakaguchi, K., Gronenborn, A.M., (1990) Biochemistry, 29, pp. 9324-9334
Eirod-Erickson, M., Rould, M.A., Nekludova, L., Pabo, C.O., (1996) Structure, 4, pp. 1171-1180
Lee, M.S., Gippert, G.R., Soman, K.V., Case, D.A., Wright, P.E., (1989) Science, 245, pp. 635-637
Houbaviy, H.B., Husheva, A., Shenk, T., Burley, S.K., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 13577-13582
Kochoyan, M., Havel, T.F., Nguyen, D.T., Dahl, C.E., Keutmann, H.T., Weiss, M.A., (1991) Biochemistry, 30, pp. 3371-3386
Berg, J. M., (1995) Acc. Chem. Res., 28, pp. 14-1
Berg, J. M., Godwin, H. A., (1997) Annu. Rev. Biophys. Biomol. Struct., 26, pp. 357-371
Schwabe, J. W. R., Klug, A., (1994) Nat. Struct. Biol., 1, pp. 345-349
Hanas, J. S., Hazuda, D. J., Bogenhagen, D. F., Wu, F. Y. -H., Wu, C. -W., (1983) J. Biol. Chem., 258, pp. 14120-14125
Wolfe, S. A., Nekludova, L., Pabo, C. O., (2000) Annu. Rev. Biophys. Biomol. Struct., 29, pp. 183-212
Foster, M. P., Wuttke, D. S., Radhakrishnan, I., Case, D. A., Gottesfeld, J. M., Wright, P. E., (1997) Nat. Struct. Biol., 4, pp. 605-608
Pedone, P. V., Ghirlando, R., Clore, G. M., Gronenborn, A., Felsenfeld, G., Omichinski, J., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 2822-2826
Omichinski, J. G., Pedone, P. V., Felsenfeld, G., Gronenborn, A., Clore, G. M., (1997) Nat. Struct. Biol., 4, pp. 122-132
Gerber, H. P., Seipel, K., Georgiev, O., Hofferer, M., Hug, M., Rusconi, S., Schaffner, W., (1994) Science, 263, pp. 808-811
Soeller, W. C., Oh, C. E., Kornberg, T. B., (1993) Mol. Cell. Biol., 13, pp. 7961-7970
Wisz, M. S., Garrett, C. Z., Hellinga, H. W., (1998) Biochemistry, 37, pp. 8269-8277
Berg, J. M., Merkle, D. L., (1989) J. Am. Chem. Soc., 111, pp. 3759-3761
W thrich, K., (1986) NMR of Proteins and Nucleic Acids, , Wiley, New York
Lee, M. S., Mortishire-Smith, R. J., Wright, P., (1992) FEBS Lett., 309, pp. 29-32
G ntert, P., Mumenthaler, C., W thrich, K., (1997) J. Mol. Biol., 273, pp. 283-298
Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., Thornton, J. M., (1996) J. Biomol. NMR, 8, pp. 477-486
Laity, J. H., Lee, B. M., Wright, P., (2001) Curr. Opin. Struct. Biol., 11, pp. 39-46
Pabo, O. C., Peisach, E., Grant, R. A., (2001) Annu. Rev. Biochem., 70, pp. 313-340
Carpino, L. A., (1993) J. Am. Chem. Soc., 115, pp. 4397-4398
Riddles, P. W., Blakeley, R. L., Zerner, B., (1983) Methods Enzymol., 91, pp. 49-60
Pace, C. N., Vajdos, F., Fee, L., Grimsley, G., Gray, T., (1995) Protein Sci., 4, pp. 2411-2423
G ntert, P., D tsch, V., Wider, G., (1992) J. Biomol. NMR, 2, pp. 619-629
Van Gunsteren, W. F., Billeter, S. R., Eising, A. A., Hunenberger, P. H., Kruger, P., Mark, A. E., Scott, W. R. P., Tironi, I. G., (1996) Biomolecular Simulation: The Gromos96 Manual and User Guide, , BIOMOs b. v. Z rich, Groningen, The Netherlands
Bowres, M. P., Schaufler, L. E., Klevit, R. E., (1999) Nat. Struct. Biol., 6, pp. 478-485
Omichinski, J. G., Clore, G. M., Appella, E., Sakaguchi, K., Gronenborn, A. M., (1990) Biochemistry, 29, pp. 9324-9334
Lee, M. S., Gippert, G. R., Soman, K. V., Case, D. A., Wright, P. E., (1989) Science, 245, pp. 635-637
Houbaviy, H. B., Husheva, A., Shenk, T., Burley, S. K., (1996) Proc. Natl. Acad. Sci. USA, 93, pp. 13577-13582
NMR structure of the single QALGGH zinc finger domain from the Arabidopsis thaliana SUPERMAN protein
Zinc finger domains of the classical type represent the most abundant DNA binding domains in eukaryotic transcription factors. Plant proteins contain from one to four zinc finger domains, which are characterized by high conservation of the sequence QALGGH, shown to be critical for DNA-binding activity The Arabidopsis thaliana SUPERMAN protein, which contains a single QALGGH zinc finger, is necessary for proper spatial development of reproductive floral tissues and has been shown to specifically bind to DNA. Here, we report the synthesis and UV and NMR spectroscopic structural characterization of a 37 amino acid SUPERMAN region complexed to a Zn2+ ion (Zn - SUP37) and present the first high-resolution structure of a classical zinc finger domain from a plant protein. The NMR structure of the SUPERMAN zinc finger domain consists of a very well-defined ββα motif, typical of all other Cys2-His2 zinc fingers structurally characterized. As a consequence, the highly conserved QALGGH sequence is located at the N terminus of the α helix. This region of the domain of animal zinc finger proteins consists of hypervariable residues that are responsible for recognizing the DNA bases. Therefore, we propose a peculiar DNA recognition code for the QALGGH zinc finger domain that includes all or some of the amino acid residues at positions - 1, 2, and 3 (numbered relative to the N terminus of the helix) and possibly others at the C-terminal end of the recognition helix. This study further confirms that the zinc finger domain, though very simple, is an extremely versatile DNA binding motif.
Zinc finger domains of the classical type represent the most abundant DNA binding domains in eukaryotic transcription factors. Plant proteins contain from one to four zinc finger domains, which are characterized by high conservation of the sequence QALGGH, shown to be critical for DNA-binding activity The Arabidopsis thaliana SUPERMAN protein, which contains a single QALGGH zinc finger, is necessary for proper spatial development of reproductive floral tissues and has been shown to specifically bind to DNA. Here, we report the synthesis and UV and NMR spectroscopic structural characterization of a 37 amino acid SUPERMAN region complexed to a Zn2+ ion (Zn - SUP37) and present the first high-resolution structure of a classical zinc finger domain from a plant protein. The NMR structure of the SUPERMAN zinc finger domain consists of a very well-defined ββα motif, typical of all other Cys2-His2 zinc fingers structurally characterized. As a consequence, the highly conserved QALGGH sequence is located at the N terminus of the α helix. This region of the domain of animal zinc finger proteins consists of hypervariable residues that are responsible for recognizing the DNA bases. Therefore, we propose a peculiar DNA recognition code for the QALGGH zinc finger domain that includes all or some of the amino acid residues at positions - 1, 2, and 3 (numbered relative to the N terminus of the helix) and possibly others at the C-terminal end of the recognition helix. This study further confirms that the zinc finger domain, though very simple, is an extremely versatile DNA binding motif.
NMR structure of the single QALGGH zinc finger domain from the Arabidopsis thaliana SUPERMAN protein
NMR structure of the single QALGGH zinc finger domain from the Arabidopsis thaliana SUPERMAN protein
Riccardi C, Capasso D, Coppola A, Platella C, Montesarchio D, Di Gaetano S, Roviello GN, Musumeci D
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Celentano V, Diana D, Di Salvo C, De Rosa L, Romanelli A, Fattorusso R, D'Andrea LD
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Farina B, De Paola I, Russo L, Capasso D, Liguoro A, Gatto AD, Saviano M, Pedone PV, Di Gaetano S, Malgieri G, Zaccaro L, Fattorusso R
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Bottini A, Wu B, Barile E, De SK, Leone M, Pellecchia M
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Smaldone G, Diana D, Pollegioni L, Di Gaetano S, Fattorusso R, Pedone E
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Diana D, Russomanno A, De Rosa L, Di Stasi R, Capasso D, Di Gaetano S, Romanelli A, Russo L, D'Andrea LD, Fattorusso R
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Mercurio FA, Di Natale C, Pirone L, Scognamiglio PL, Marasco D, Pedone EM, Saviano M, Leone M
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Russo L, Palmieri M, Caso JV, Abrosca GD, Diana D, Malgieri G, Baglivo I, Isernia C, Pedone PV, Fattorusso R
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Scognamiglio PL, Di Natale C, Leone M, Poletto M, Vitagliano L, Tell G, Marasco D
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Palmieri M, Russo L, Malgieri G, Esposito S, Baglivo I, Rivellino A, Farina B, de Paola I, Zaccaro L, Milardi D, Isernia C, Pedone PV, Fattorusso R
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De Rosa L, Diana D, Basile A, Russomanno A, Isernia C, Turco MC, Fattorusso R, D'Andrea LD
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Palmieri M, Malgieri G, Russo L, Baglivo I, Esposito S, Netti F, Del Gatto A, De Paola I, Zaccaro L, Pedone PV, Isernia C, Milardi D, Fattorusso R
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Mercurio FA, Marasco D, Pirone L, Scognamiglio PL, Pedone E, Pellecchia M, Leone M
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Roviello GN, Musumeci D, Bucci EM, Pedone C
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Tamburino R, Severino V, Sandomenico A, Ruvo M, Parente A, Chambery A, Di Maro A
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Farina B, Pirone L, Russo L, Viparelli F, Doti N, Pedone C, Pedone E, Fattorusso R
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Abbate M, Casella G, Fiore T, Grasso G, Pellerito C, Scopelliti M, Spinella A, Pellerito L
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Roviello GN, Gröschel S, Pedone C, Diederichsen U
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Severino V, Chambery A, Di Maro A, Marasco D, Ruggiero A, Berisio R, Giansanti F, Ippoliti R, Parente A
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Puglisi A, Rizzarelli E, Vecchio G, Iacovino R, Benedetti E, Pedone C, Saviano M
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Ruggiero A, Di Maro A, Severino V, Chambery A, Berisio R
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Kaczmarek K, Farina B, Zubrzak P, Jankowski S, Zimecki M, Suder P, Benedetti E, Fattorusso R, Saviano M, Zabrocki J
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Diana D, Ziaco B, Colombo G, Scarabelli G, Romanelli A, Fedone C, Fattorusso R, D'Andrea LD
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Costantino V, De Rosa C, Fattorusso E, Imperatore C, Mangoni A, Irace C, Maffettone C, Capasso D, Malorni L, Palumbo R, Pedone C
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Impact Factor: 2.914
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Malgieri G, Russo L, Esposito S, Baglivo I, Zaccaro L, Pedone EM, Di Blasio B, Isernia C, Pedone PV, Fattorusso R
* The Prokaryotic Cys2his2 Zinc Finger Domain Adopts A Novel Fold As Revealed By The Solution Structure Of Agrobacterium Tumefaciens Ros Dna Binding Domain (286 visite)
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De Pinto V, Tomasello F, Messina A, Guarino F, Benz R, La Mendola D, Magrì A, Milardi D, Pappalardo G
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Ruggiero A, Chambery A, Di Maro A, Mastroianni A, Parente A, Berisio R
* Crystallization and preliminary X-ray diffraction analysis of PD-L1, a highly glycosylated ribosome inactivating protein with DNase activity (246 visite)
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Ruggiero A, Chambery A, Di Maro A, Pisante M, Parente A, Berisio R
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Impact Factor: 1.097
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Cucinotta V, Giuffrida A, Grasso G, Maccarrone G, Messina M, Vecchio G
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Milardi D, Arnesano F, Grasso G, Magrì A, Tabbì G, Scintilla S, Natile G, Rizzarelli E
* Ubiquitin stability and the Lys63-linked polyubiquitination site are compromised on copper binding (251 visite)
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Impact Factor: 10.031
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Dalla Bona A, Formaggio F, Peggion C, Kaptein B, Broxterman Quirinus B, Galdiero S, Galdiero M, Vitiello M, Benedetti E, Toniolo C
* Synthesis, conformation, and bioactivity of novel analogues of the antiviral lipopeptide halovir (398 visite)
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Esposito S, Baglivo I, Malgieri G, Russo L, Zaccaro L, D'Andrea LD, Mammucari M, Di Blasio B, Isernia C, Fattorusso R, Pedone PV
* A novel type of zinc finger DNA binding domain in the Agrobacterium tumefaciens transcriptional regulator Ros (369 visite)
Biochemistry (ISSN: 0006-2960, 1520-4995, 1520-4995electronic), 2006 Sep 29; 45(34): 10394-10405.
Impact Factor: 3.633
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Mannini R, Rivieccio V, D'Auria S, Tanfani F, Ausili A, Pedone C, Grimaldi G, Facchiano A
* Structure/function of KRAB repression domains: Structural properties of KRAB modules inferred from hydrodynamic, circular dichroism, and FTIR spectroscopic analyses (394 visite)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2006 Feb 15; 62(3): 604-616.
Impact Factor: 3.73
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De Capua A, Goodman M, Amino Y, Saviano M, Benedetti E
* Conformation analysis of aspartame-based sweeteners by NMR spectroscopy, molecular dynamics simulations, and X-ray diffraction studies (554 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2006 Feb; 7(2): 377-387.
Impact Factor: 4.1
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D'Andrea LD, Iaccarino G, Fattorusso R, Sorriento D, Carannante C, Capasso D, Trimarco B, Pedone C
* Targeting angiogenesis: Structural characterization and biological properties of a de novo engineered VEGF mimicking peptide (416 visite)
P Natl Acad Sci Usa (ISSN: 0027-8424, 1091-6490, 0027-8424print), 2005 Oct 4; 102(40): 14215-14220.
Impact Factor: 10.231
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Falcigno L, Oliva R, D'Auria G, Maletta M, Dettin M, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site 3: Role of site-specific mutations (298 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2004 Dec 3; 5(12): 1653-1661.
Impact Factor: 3.474
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Lombardi A, Nastri F, Marasco D, Maglio O, De Sanctis G, Sinibaldi F, Santucci R, Coletta M, Pavone V
* Design of a new mimochrome with unique topology (410 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2003 Nov 21; 9(22): 5643-5654.
Impact Factor: 4.353
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Oliva R, Falcigno L, D'Auria G, Dettin M, Scarinci C, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site (308 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Sep 4; 4(8): 727-733.
Impact Factor: 3.992
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Oliva R, Falcigno L, D'Auria G, Dettin M, Scarinci C, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site, 2: relevance of an N-terminal helix (260 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Aug 4; 4(8): 727-733.
Impact Factor: 2.92
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Dathan N, Zaccaro L, Esposito S, Isernia C, Omichinski JG, Riccio A, Pedone C, Di Blasio B, Fattorusso R, Pedone PV
* The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys(2)-His(2) zinc finger motif (370 visite)
Nucleic Acids Res (ISSN: 0305-1048, 1362-4962, 1362-4962electronic), 2002 Nov 15; 30(22): 4945-4951.
Impact Factor: 7.051
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Formaggio F, Bonchio M, Crisma M, Peggion C, Mezzato S, Polese A, Barazza A, Antonello S, Maran F, Broxterman QB, Kaptein B, Kamphuis J, Vitale RM, Saviano M, Benedetti E, Toniolo C
* Nitroxyl peptides as catalysts of enantioselective oxidations (429 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2002; 8(1): [d]84-93.
Impact Factor: 4.238
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Saviano G, Rossi F, Benedetti E, Pedone C, Mierke DF, Maione A, Zanotti G, Tancredi T, Saviano M
* Structural consequences of metal complexation of cyclo[Pro-Phe-Phe-Ala-Xaa]2 decapeptides (366 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2001 Mar 16; 7(6): 1176-1183.
Impact Factor: 4.614
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Zanotti G, Falcigno L, Saviano M, D'Auria G, Bruno BM, Campanile T, Paolillo L
* Solid state and solution conformation of [Ala7]-phalloidin: A synthetic phallotoxin analogue (369 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2001; 7(7): 1479-1485.
Impact Factor: 4.614
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Impellizzeri G, Pappalardo G, Purrello R, Rizzarelli E, Santoro AM
Synthesis, spectroscopic characterisation, and metal ion interaction of a new α-helical peptide (402 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 1998; 4(9): 1791-1798.
Impact Factor: 5.153
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D'Auria G, Maglio O, Nastri F, Lombardi A, Mazzeo M, Morelli G, Paolillo L, Pedone C, Pavone V
Hemoprotein models based on a covalent helix-heme-helix sandwich: 2. Structural characterization of Co(III) mimochrome I Δ and Λ isomers (355 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 1997; 3(3): 350-362.
Impact Factor: 4.828
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Pavone V, Rossi F, Pucci P, Andini S, Ferrara L, Di Blasio B, Pedone C
Studies on gliadin related peptides. I. Synthesis, purification and 1H n. m. r. characterization of the pentapeptide H-Tyr-(Gln)3-Pro-OH (867 visite)
Int J Pept Protein Res (ISSN: 0367-8377, 0367-8377print), 1983 Oct; 22(4): 482-488.
Impact Factor: 1.255
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Riccardi C, Capasso D, Coppola A, Platella C, Montesarchio D, Di Gaetano S, Roviello GN, Musumeci D
* Synthesis, Antiproliferative Activity, and DNA Binding Studies of Nucleoamino Acid-Containing Pt(II) Complexes (90 visite)
Pharmaceuticals (ISSN: 1424-8247linking), 2020 Sep 30; 13(10): 284-284.
Impact Factor: 4.421
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Vincenzi M, Mercurio FA, Leone M
* NMR spectroscopy in the conformational analysis of peptides: an overview (24 visite)
Curr Med Chem (ISSN: 0929-8673linking), 2020 Jul 2; N/D: N/D-N/D.
Impact Factor: 4.184
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Mercurio FA, Di Natale C, Pirone L, Vincenzi M, Marasco D, De Luca S, Pedone EM, Leone M
* Exploring the ability of cyclic peptides to target SAM domains: a computational and experimental study (203 visite)
Chembiochem (ISSN: 1439-4227linking, 1439-7633), 2020 Mar 2; 21(5): 702-711.
Impact Factor: 2.641
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Riccardi C, Capasso D, Rozza GM, Platella C, Montesarchio D, Di Gaetano S, Marzo T, Pratesi A, Messori L, Roviello GN, Musumeci D
* Synthesis, DNA binding studies, and antiproliferative activity of novel Pt(II)- complexes with an L-alanyl-based ligand (196 visite)
J Inorg Biochem (ISSN: 0162-0134linking), 2020 Feb; 203: 110868-110868.
Impact Factor: 3.224
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Bocian A, Szymańska M, Brykczyńska D, Kubicki M, Wałęsa-chorab M, Roviello GN, Fik-jaskółka MA, Gorczyński A, Patroniak V
* New artificial biomimetic enzyme analogues based on iron(II/III) Schiff Base complexes: an effect of (benz)imidazole organic moieties on phenoxazinone synthase and DNA recognition (161 visite)
Molecules (ISSN: 1420-3049linking, 1420-3049electronic), 2019 Aug 31; 24(17): 3173-3173.
Impact Factor: 3.06
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Farina B, Del Gatto A, Comegna D, Di Gaetano S, Capasso D, Isernia C, Saviano M, Fattorusso R, Zaccaro L, Russo L
* Conformational studies of RGDechi peptide by natural-abundance NMR spectroscopy (185 visite)
J Pept Sci (ISSN: 1075-2617linking, 1099-1387electronic), 2019 May; 25(5): e3166-e3166.
Impact Factor: 1.807
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Grage SL, Kara S, Bordessa A, Doan V, Rizzolo F, Putzu M, Kubar T, Papini AM, Chaume G, Brigaud T, Afonin S, Ulrich AS
* Orthogonal (19) F-Labeling for Solid-State NMR Spectroscopy Reveals the Conformation and Orientation of Short Peptaibols in Membranes (304 visite)
Chemistry (ISSN: 1521-3765electronic, 0947-6539linking), 2018 Jan 11; N/D: N/D-N/D.
Impact Factor: 5.476
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Di Stasi R, Diana D, Capasso D, Di Gaetano S, De Rosa L, Celentano V, Isernia C, Fattorusso R, D'Andrea LD
* VEGFR Recognition Interface of a Proangiogenic VEGF-Mimetic Peptide Determined In Vitro and in the Presence of Endothelial Cells by NMR Spectroscopy (268 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2018; 24(44): 11461-11466.
Impact Factor: 5.16
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Calvanese L, Foca A, Sandomenico A, Foca G, Caporale A, Doti N, Iaccarino E, Leonardi A, D'Auria G, Ruvo M, Falcigno L
* Structural insights into the interaction of a monoclonal antibody and Nodal peptides by STD-NMR spectroscopy (435 visite)
Bioorg Med Chem (ISSN: 0968-0896, 1464-3391, 0968-0896linking), 2017 Dec 15; 25(24): 6589-6596.
Impact Factor: 2.881
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Cavallari E, Carrera C, Aime S, Reineri F
* (13) C MR Hyperpolarization of Lactate by Using ParaHydrogen and Metabolic Transformation in Vitro (216 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2017 Jan 23; 23(5): 1200-1204.
Impact Factor: 5.16
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Lanza V, Travaglia A, Malgieri G, Fattorusso R, GrassoG, Di Natale G, Zito V, Arena G, Milardi D, Rizzarelli E
* Ubiquitin Associates with the N-Terminal Domain of Nerve Growth Factor: The Role of Copper(II) Ions (223 visite) (PDF 157 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2016 Dec 05; 22(49): 17767-17775.
Impact Factor: 5.317
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D'Abrosca G, Russo L, Palmieri M, Baglivo I, Netti F, De Paola I, Zaccaro L, Farina B, Iacovino R, Pedone PV, Isernia C, Fattorusso R, Malgieri G
* The (unusual) aspartic acid in the metal coordination sphere of the prokaryotic zinc finger domain (182 visite)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 2016 Aug; 161: 91-98.
Impact Factor: 3.348
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Celentano V, Diana D, Di Salvo C, De Rosa L, Romanelli A, Fattorusso R, D'Andrea LD
* 1, 2, 3-Triazole Bridge as Conformational Constrain in beta-Hairpin Peptides: Analysis of Hydrogen-Bonded Positions (361 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2016 Apr 11; 22(16): 5534-5537.
Impact Factor: 5.317
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Farina B, De Paola I, Russo L, Capasso D, Liguoro A, Gatto AD, Saviano M, Pedone PV, Di Gaetano S, Malgieri G, Zaccaro L, Fattorusso R
* A Combined NMR and Computational Approach to Determine the RGDechi-hCit-alphav beta3 Integrin Recognition Mode in Isolated Cell Membranes (353 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2016 Jan 11; 22(2): 681-693.
Impact Factor: 5.317
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Bottini A, Wu B, Barile E, De SK, Leone M, Pellecchia M
* High-Throughput Screening (HTS) by NMR Guided Identification of Novel Agents Targeting the Protein Docking Domain of YopH (348 visite)
Chemmedchem (ISSN: 1860-7179, 1860-7187, 1860-7179linking), 2015 Nov 23; 11(8): 919-927.
Impact Factor: 2.98
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Smaldone G, Diana D, Pollegioni L, Di Gaetano S, Fattorusso R, Pedone E
* Insight into conformational modification of alpha-synuclein in the presence of neuronal whole cells and of their isolated membranes (328 visite)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468), 2015 Feb 18; 589(7): 798-804.
Impact Factor: 3.519
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Diana D, Russomanno A, De Rosa L, Di Stasi R, Capasso D, Di Gaetano S, Romanelli A, Russo L, D'Andrea LD, Fattorusso R
* Functional Binding Surface Of A Beta-Hairpin Vegf Receptor Targeting Peptide Determined By Nmr Spectroscopy In Living Cells (374 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2015 Jan 2; 21(1): 91-95.
Impact Factor: 5.771
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Mercurio FA, Di Natale C, Pirone L, Scognamiglio PL, Marasco D, Pedone EM, Saviano M, Leone M
* Peptide Fragments of Odin-Sam1: Conformational Analysis and Interaction Studies with EphA2-Sam (395 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-4227linking), 2015; 16(11): 1629-1636.
Impact Factor: 2.85
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Russo L, Palmieri M, Caso JV, Abrosca GD, Diana D, Malgieri G, Baglivo I, Isernia C, Pedone PV, Fattorusso R
* Towards understanding the molecular recognition process in prokaryotic zinc-finger domain (295 visite)
Eur J Med Chem (ISSN: 0223-5234, 1768-3254, 0223-5234linking), 2015; 91: 100-108.
Impact Factor: 3.902
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Vitale RM, Zaccaro L, Di Blasio B, Fattorusso R, Isernia C, Amodeo P, Pedone C, Saviano M
* Conformational features of human melanin-concentrating hormone: an NMR and computational analysis (371 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-4227linking), 2014 Sep 17; 4(1): 73-81.
Impact Factor: 3.088
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Scognamiglio PL, Di Natale C, Leone M, Poletto M, Vitagliano L, Tell G, Marasco D
* G-quadruplex DNA recognition by nucleophosmin: new insights from protein dissection (340 visite)
Bba-Gen Subjects (ISSN: 0005-2728, 0006-3002print, 1570-9639print), 2014 Jun; 1840(6): 2050-2059.
Impact Factor: 5.353
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Palmieri M, Russo L, Malgieri G, Esposito S, Baglivo I, Rivellino A, Farina B, de Paola I, Zaccaro L, Milardi D, Isernia C, Pedone PV, Fattorusso R
* Deciphering the zinc coordination properties of the prokaryotic zinc finger domain: The solution structure characterization of Ros87 H42A functional mutant (313 visite)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 2014 Feb; 131: 30-36.
Impact Factor: 3.444
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De Rosa L, Diana D, Basile A, Russomanno A, Isernia C, Turco MC, Fattorusso R, D'Andrea LD
* Design, Structural And Biological Characterization Of A Vegf Inhibitor Beta-Hairpin-Constrained Peptide (440 visite)
Eur J Med Chem (ISSN: 0223-5234, 1768-3254, 0223-5234linking), 2014; 73: 210-216.
Impact Factor: 3.447
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Malgieri G, Palmieri M, Esposito S, Maione V, Russo L, Baglivo I, De Paola I, Milardi D, Diana D, Zaccaro L, Pedone PV, Fattorusso R, Isernia C
* Zinc To Cadmium Replacement In The Prokaryotic Zinc-Finger Domain (361 visite)
Metallomics (ISSN: 1756-591x, 1756-5901, 1756-591xelectronic), 2013 Dec 18; 6(1): 96-104.
Impact Factor: 3.978
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Diana D, Smaldone G, De Antonellis P, Pirone L, Carotenuto M, Alonzi A, Di Gaetano S, Zollo M, Pedone E, Fattorusso R
* Mapping Functional Interaction Sites of Human Prune C-Terminal Domain by NMR Spectroscopy in Human Cell Lysates (282 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2013 Sep 9; 19(37): 12217-12220.
Impact Factor: 5.696
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Farina B, Doti N, Pirone L, Malgieri G, Pedone E, Ruvo M, Fattorusso R
* Molecular basis of the PED/PEA15 interaction with the C-terminal fragment of phospholipase D1 revealed by NMR spectroscopy (399 visite)
Bba-Gen Subjects (ISSN: 1570-9639, 0006-3002, 0925-4439), 2013 Sep; 1834(8): 1572-1580.
Impact Factor: 3.191
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Palmieri M, Malgieri G, Russo L, Baglivo I, Esposito S, Netti F, Del Gatto A, De Paola I, Zaccaro L, Pedone PV, Isernia C, Milardi D, Fattorusso R
* Structural Zn(II) Implies a Switch from Fully Cooperative to Partly Downhill Folding in Highly Homologous Proteins (327 visite)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126), 2013 Apr 2; 135(13): 5220-5228.
Impact Factor: 11.444
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Mercurio FA, Marasco D, Pirone L, Scognamiglio PL, Pedone E, Pellecchia M, Leone M
* Heterotypic Sam-Sam Association Between Odin-Sam1 And Arap3-Sam: Binding Affinity And Structural Insights (280 visite)
Chembiochem (ISSN: 1439-4227, 1439-9422, 1439-7633), 2013 Jan 2; 14(1): 100-106.
Impact Factor: 2.92
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Roviello GN, Musumeci D, Bucci EM, Pedone C
* Synthesis of a diaminopropanoic acid-based nucleoamino acid and assembly of cationic nucleopeptides for biomedical applications (373 visite)
Amino Acids (ISSN: 0939-4451, 1438-2199, 1438-2199electronic), 2012 Dec; 43(6): 2537-2543.
Impact Factor: 3.914
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Tamburino R, Severino V, Sandomenico A, Ruvo M, Parente A, Chambery A, Di Maro A
* De novo sequencing and characterization of a novel Bowman-Birk inhibitor from Lathyrus sativus L. seeds by electrospray mass spectrometry (298 visite)
Mol Biosyst (ISSN: 1742-206x, 1742-2051linking, 1742-2051electronic), 2012 Oct 30; 8(12): 3232-3241.
Impact Factor: 3.35
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Di Maro A, Berisio R, Ruggiero A, Tamburino R, Severino V, Zacchia E, Parente A
* Structural and enzymatic properties of an in vivo proteolytic form of PD-S2, type 1 ribosome-inactivating protein from seeds of Phytolacca dioica (300 visite)
Biochem Biophys Res Commun (ISSN: 0006-291x), 2012 May 11; 421(3): 514-520.
Impact Factor: 2.406
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Malgieri G, Zaccaro L, Leone M, Bucci E, Esposito S, Baglivo I, Del Gatto A, Russo L, Scandurra R, Pedone PV, Fattorusso R, Isernia C
* Zinc to Cadmium Replacement in the A. thaliana SUPERMAN Cys(2)His(2) Zinc Finger Induces Structural Rearrangements of Typical DNA Base Determinant Positions (312 visite)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2011 Nov; 95(11): 801-810.
Impact Factor: 2.87
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Cucinotta V, Giuffrida A, Grasso G, MacCarrone G, Mazzaglia A, Messina M, Vecchio G
* Diaminotrehalose-capped β-cyclodextrin, a new member of hemispherodextrins: Synthesis, thermodynamic and spectroscopic characterization and its exploitation in chiral electrokinetic chromatography (316 visite)
J Sep Sci (ISSN: 1615-9306), 2011 Jan; 34(1): 70-76.
Impact Factor: 2.733
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Verardi R, Traaseth NJ, Shi L, Porcelli F, Monfregola L, De Luca S, Amodeo P, Veglia G, Scaloni A
* Probing membrane topology of the antimicrobial peptide distinctin by solid-state NMR spectroscopy in zwitterionic and charged lipid bilayers (396 visite)
Bba-Gen Subjects (ISSN: 0005-2736, 0006-3002, 0925-4439), 2011 Jan; 1808(1): 34-40.
Impact Factor: 3.99
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Farina B, Pirone L, Russo L, Viparelli F, Doti N, Pedone C, Pedone E, Fattorusso R
* NMR backbone dynamics studies of human PED/PEA-15 outline protein functional sites (548 visite)
Febs J (ISSN: 1742-4658, 1742-464x, 1742-4658electronic), 2010 Oct; 277(20): 4229-4240.
Impact Factor: 3.129
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Diana D, Ziaco B, Scarabelli G, Pedone C, Colombo G, D'Andrea LD, Fattorusso R
* Structural analysis of a helical peptide unfolding pathway (323 visite)
Chemistry (ISSN: 1521-3765, 0947-6539, 1521-3765electronic), 2010 May 10; 16(18): 5400-5407.
Impact Factor: 5.476
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Abbate M, Casella G, Fiore T, Grasso G, Pellerito C, Scopelliti M, Spinella A, Pellerito L
* Structural characterization of triorganotin(IV) complexes with sodium fusidate and DFT calculations (237 visite)
J Organomet Chem (ISSN: 0022-328x), 2010 May 1; 695(9): 1405-1413.
Impact Factor: 2.205
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Roviello GN, Gröschel S, Pedone C, Diederichsen U
* Synthesis of novel MMT/acyl-protected nucleo alanine monomers for the preparation of DNA/alanyl-PNA chimeras (294 visite)
Amino Acids (ISSN: 1438-2199, 0939-4451, 1438-2199electronic), 2010 May; 38(5): 1301-1309.
Impact Factor: 4.106
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Severino V, Chambery A, Di Maro A, Marasco D, Ruggiero A, Berisio R, Giansanti F, Ippoliti R, Parente A
* The role of the glycan moiety on the structure-function relationships of PD-L1, type 1 ribosome-inactivating protein from P. dioica leaves (316 visite)
Mol Biosyst (ISSN: 1742-206x), 2010; 6(3): 570-579.
Impact Factor: 3.825
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Puglisi A, Rizzarelli E, Vecchio G, Iacovino R, Benedetti E, Pedone C, Saviano M
* Crystal And Molecular Structure Of Beta-Cyclodextrins Functionalized With The Anti-Inflammatory Drug Etodolac (357 visite)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2009 Dec; 91(12): 1227-1235.
Impact Factor: 2.605
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Ruggiero A, Di Maro A, Severino V, Chambery A, Berisio R
* Crystal structure of PD-L1, a ribosome inactivating protein from Phytolacca dioica L. leaves with the property to induce DNA cleavage (353 visite)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2009 Dec; 91(12): 1135-1142.
Impact Factor: 2.605
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Kaczmarek K, Farina B, Zubrzak P, Jankowski S, Zimecki M, Suder P, Benedetti E, Fattorusso R, Saviano M, Zabrocki J
* Synthesis, conformational analysis and immunological activity of β3Phe-substituted Cyclolinopeptide A analogues (396 visite)
J Pept Sci (ISSN: 1075-2617, 1099-1387, 1075-2617print), 2009 Mar; 15(3): 166-174.
Impact Factor: 1.807
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Diana D, Ziaco B, Colombo G, Scarabelli G, Romanelli A, Fedone C, Fattorusso R, D'Andrea LD
* Structural determinants of the unusual helix stability of a de novo engineered vascular endothelial growth factor (VEGF) mimicking peptide (364 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2008; 14(14): 4164-4166.
Impact Factor: 5.454
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Costantino V, De Rosa C, Fattorusso E, Imperatore C, Mangoni A, Irace C, Maffettone C, Capasso D, Malorni L, Palumbo R, Pedone C
* Oreacerebrosides: Bioactive cerebrosides with a triunsaturated sphingoid base from the sea star Oreaster reticulatus (228 visite)
Eur J Org Chem (ISSN: 1434-193x), 2007 Nov; (31): 5277-5283.
Impact Factor: 2.914
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Malgieri G, Russo L, Esposito S, Baglivo I, Zaccaro L, Pedone EM, Di Blasio B, Isernia C, Pedone PV, Fattorusso R
* The Prokaryotic Cys2his2 Zinc Finger Domain Adopts A Novel Fold As Revealed By The Solution Structure Of Agrobacterium Tumefaciens Ros Dna Binding Domain (286 visite)
P Natl Acad Sci Usa (ISSN: 0027-8424, 1091-6490, 0027-8424print), 2007 Oct 30; 104(44): 17341-17346.
Impact Factor: 9.598
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De Pinto V, Tomasello F, Messina A, Guarino F, Benz R, La Mendola D, Magrì A, Milardi D, Pappalardo G
* Determination of the conformation of the human VDAC1 N-terminal peptide, a protein moiety essential for the functional properties of the pore (358 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2007 May 7; 8(7): 744-756.
Impact Factor: 3.446
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Ruggiero A, Chambery A, Di Maro A, Mastroianni A, Parente A, Berisio R
* Crystallization and preliminary X-ray diffraction analysis of PD-L1, a highly glycosylated ribosome inactivating protein with DNase activity (246 visite)
Protein Pept Lett (ISSN: 0929-8665, 1875-5305), 2007; 14(4): 407-409.
Impact Factor: 1.097
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Ruggiero A, Chambery A, Di Maro A, Pisante M, Parente A, Berisio R
* Crystallization and preliminary x-ray diffraction analysis of PD-L4, a ribosome inactivating protein from Phytolacca dioica L. leaves (307 visite)
Protein Pept Lett (ISSN: 0929-8665, 1875-5305), 2007; 14(1): 97-100.
Impact Factor: 1.097
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Cucinotta V, Giuffrida A, Grasso G, Maccarrone G, Messina M, Vecchio G
* High selectivity in new chiral separations of dansyl amino acids by cyclodextrin derivatives in electrokinetic chromatography (223 visite)
J Chromatogr A (ISSN: 0021-9673), 2007; 1155(2): 172-179.
Impact Factor: 3.641
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Milardi D, Arnesano F, Grasso G, Magrì A, Tabbì G, Scintilla S, Natile G, Rizzarelli E
* Ubiquitin stability and the Lys63-linked polyubiquitination site are compromised on copper binding (251 visite)
Angew Chem Int Ed (ISSN: 1433-7851, 1521-3773electronic), 2007; 46(42): 7993-7995.
Impact Factor: 10.031
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Dalla Bona A, Formaggio F, Peggion C, Kaptein B, Broxterman Quirinus B, Galdiero S, Galdiero M, Vitiello M, Benedetti E, Toniolo C
* Synthesis, conformation, and bioactivity of novel analogues of the antiviral lipopeptide halovir (398 visite)
J Pept Sci (ISSN: 1075-2617, 1099-1387, 1075-2617print), 2006 Dec; 12(12): 748-757.
Impact Factor: 1.801
Dettagli Esporta in BibTeX Esporta in EndNote
Esposito S, Baglivo I, Malgieri G, Russo L, Zaccaro L, D'Andrea LD, Mammucari M, Di Blasio B, Isernia C, Fattorusso R, Pedone PV
* A novel type of zinc finger DNA binding domain in the Agrobacterium tumefaciens transcriptional regulator Ros (369 visite)
Biochemistry (ISSN: 0006-2960, 1520-4995, 1520-4995electronic), 2006 Sep 29; 45(34): 10394-10405.
Impact Factor: 3.633
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Mannini R, Rivieccio V, D'Auria S, Tanfani F, Ausili A, Pedone C, Grimaldi G, Facchiano A
* Structure/function of KRAB repression domains: Structural properties of KRAB modules inferred from hydrodynamic, circular dichroism, and FTIR spectroscopic analyses (394 visite)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2006 Feb 15; 62(3): 604-616.
Impact Factor: 3.73
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De Capua A, Goodman M, Amino Y, Saviano M, Benedetti E
* Conformation analysis of aspartame-based sweeteners by NMR spectroscopy, molecular dynamics simulations, and X-ray diffraction studies (554 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2006 Feb; 7(2): 377-387.
Impact Factor: 4.1
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D'Andrea LD, Iaccarino G, Fattorusso R, Sorriento D, Carannante C, Capasso D, Trimarco B, Pedone C
* Targeting angiogenesis: Structural characterization and biological properties of a de novo engineered VEGF mimicking peptide (416 visite)
P Natl Acad Sci Usa (ISSN: 0027-8424, 1091-6490, 0027-8424print), 2005 Oct 4; 102(40): 14215-14220.
Impact Factor: 10.231
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Falcigno L, Oliva R, D'Auria G, Maletta M, Dettin M, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site 3: Role of site-specific mutations (298 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2004 Dec 3; 5(12): 1653-1661.
Impact Factor: 3.474
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Lombardi A, Nastri F, Marasco D, Maglio O, De Sanctis G, Sinibaldi F, Santucci R, Coletta M, Pavone V
* Design of a new mimochrome with unique topology (410 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2003 Nov 21; 9(22): 5643-5654.
Impact Factor: 4.353
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Oliva R, Falcigno L, D'Auria G, Dettin M, Scarinci C, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site (308 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Sep 4; 4(8): 727-733.
Impact Factor: 3.992
Dettagli Esporta in BibTeX Esporta in EndNote
Oliva R, Falcigno L, D'Auria G, Dettin M, Scarinci C, Pasquato A, Di Bello C, Paolillo L
* Structural investigation of the HIV-1 envelope glycoprotein gp160 cleavage site, 2: relevance of an N-terminal helix (260 visite)
Chembiochem (ISSN: 1439-4227, 1439-7633, 1439-7633electronic), 2003 Aug 4; 4(8): 727-733.
Impact Factor: 2.92
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Dathan N, Zaccaro L, Esposito S, Isernia C, Omichinski JG, Riccio A, Pedone C, Di Blasio B, Fattorusso R, Pedone PV
* The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys(2)-His(2) zinc finger motif (370 visite)
Nucleic Acids Res (ISSN: 0305-1048, 1362-4962, 1362-4962electronic), 2002 Nov 15; 30(22): 4945-4951.
Impact Factor: 7.051
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Formaggio F, Bonchio M, Crisma M, Peggion C, Mezzato S, Polese A, Barazza A, Antonello S, Maran F, Broxterman QB, Kaptein B, Kamphuis J, Vitale RM, Saviano M, Benedetti E, Toniolo C
* Nitroxyl peptides as catalysts of enantioselective oxidations (429 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2002; 8(1): [d]84-93.
Impact Factor: 4.238
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Saviano G, Rossi F, Benedetti E, Pedone C, Mierke DF, Maione A, Zanotti G, Tancredi T, Saviano M
* Structural consequences of metal complexation of cyclo[Pro-Phe-Phe-Ala-Xaa]2 decapeptides (366 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2001 Mar 16; 7(6): 1176-1183.
Impact Factor: 4.614
Dettagli Esporta in BibTeX Esporta in EndNote
Zanotti G, Falcigno L, Saviano M, D'Auria G, Bruno BM, Campanile T, Paolillo L
* Solid state and solution conformation of [Ala7]-phalloidin: A synthetic phallotoxin analogue (369 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2001; 7(7): 1479-1485.
Impact Factor: 4.614
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Impellizzeri G, Pappalardo G, Purrello R, Rizzarelli E, Santoro AM
Synthesis, spectroscopic characterisation, and metal ion interaction of a new α-helical peptide (402 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 1998; 4(9): 1791-1798.
Impact Factor: 5.153
Dettagli Esporta in BibTeX Esporta in EndNote
D'Auria G, Maglio O, Nastri F, Lombardi A, Mazzeo M, Morelli G, Paolillo L, Pedone C, Pavone V
Hemoprotein models based on a covalent helix-heme-helix sandwich: 2. Structural characterization of Co(III) mimochrome I Δ and Λ isomers (355 visite)
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 1997; 3(3): 350-362.
Impact Factor: 4.828
Dettagli Esporta in BibTeX Esporta in EndNote
Pavone V, Rossi F, Pucci P, Andini S, Ferrara L, Di Blasio B, Pedone C
Studies on gliadin related peptides. I. Synthesis, purification and 1H n. m. r. characterization of the pentapeptide H-Tyr-(Gln)3-Pro-OH (867 visite)
Int J Pept Protein Res (ISSN: 0367-8377, 0367-8377print), 1983 Oct; 22(4): 482-488.
Impact Factor: 1.255
Dettagli Esporta in BibTeX Esporta in EndNote
66 Records (66 escludendo Abstract e Conferenze).
Impact factor totale: 271.182 (271.182 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 273.121 (273.121 escludendo Abstract e Conferenze).
Impact factor totale: 271.182 (271.182 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 273.121 (273.121 escludendo Abstract e Conferenze).
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