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Query: Site:
Brain segmentation for radiation oncology application
Contact person: Marco Comerci, marco.comerciibb.cnr.it


Description ▼
This activity is focused on developing a software procedure for automated segmentation of brain structures starting from brain CTs and/or MRs.
The software must support the manual 3D drawing or importing of a lesion ROI, excluded during segmentation.
The software applies also an atlas on the segmentation, both on the Gray Matter and the White Matter and produces an RTP structure file, with contours for each slice and for each ROI.
Optionally the software can import an RT dose DICOM file with which it calculates dose-volume histograms.
The activity is aimed to develop, test, validate and improve the software and use it on the field for research purposes.

Actors ▼
Mario Quarantelli, quaranteunina.it
Marco Comerci, marco.comerciibb.cnr.it
Roberto Pacelli, roberto.pacelliibb.cnr.it
Manuel Conson, roberto.pacelliibb.cnr.it
Raffaele Liuzzi, raffaele.liuzzicnr.it
Laura Cella, laura.cellacnr.it

Keywords ▼
Brain tumor, Radiotherapy, MRI, DVH, dose, dose volume histogram, Atlas, Atlas based segmentation,

Research Areas ▼
Cancer DiseasesQuantitative Imaging

Figures ▼





Selected Papers ▼
Automated delineation of brain structures in patients undergoing radiotherapy for primary brain tumors: From atlas to dose-volume histograms (PDF restricted)
Authors: Conson MCella LPacelli RComerci MLiuzzi RSalvatore MQuarantelli M
Affiliations : *** IBB - CNR Affiliation. Department of Advanced... (more)
Journal: Radiother Oncol Elsevier Ireland Ltd (ISSN: 0167-8140... (more)
Impact factor: 4.857, 5-year impact factor: 4.67
Date: 2014 Sep, Volume: 112(3), Pages: 326-331
Paper type: Journal Article, 
Keywords: Atlas-Based Segmentation, Brain Tumors, Radiotherapy... (more)
Abstract: Purpose To implement and evaluate a magnetic res... (more)
References: Lawrence, Y.R., Li, X.A., El Naqa, I., Radiation dose... (more)
Url: http://www.scopus.com/inward/r ... 740fbb25f59382481322dffa8

Related Activities ▼
Relaxometry based MRI brain segmentation (2124 views)
Relaxometry based MRI limb segmentation (1445 views)
Software development of digital MRI brain phantom (3094 views)
Partial Volume Effect Correction software maintenance (130 views)
Drug Delivery (202 views)

Related Papers ▼
Automated delineation of brain structures in patients undergoing radiotherapy for primary brain tumors: From atlas to dose-volume histograms (restricted access) (168 views)

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* Posterior cortical atrophy with prominent alexia without agraphia in a Tourette syndrome (38 views)
Fragassi NA, Chiacchio L, Errichiello L, Pappata S, Tedeschi MR, Striano P, Striano S
Neurol Sci (ISSN: 1590-1874, 1590-3478), 2011 Dec; 32(6): 1129-1133.

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* Assessment of cardiac sympathetic activity by MIBG imaging in patients with heart failure: a clinical appraisal (65 views)
Perrone-Filardi P, Paolillo S, Dellegrottaglie S, Gargiulo P, Savarese G, Marciano C, Casaretti L, Cecere M, Musella F, Pirozzi E, Parente A, Cuocolo A
Heart (ISSN: 1468-201x, 1355-6037), 2011 Nov; 97(22): 1828-1833.

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* Biodistribution and radiation dosimetry of the 18 kDa translocator protein (TSPO) radioligand [ 18F]FEDAA1106: A human whole-body PET study (58 views)
Takano A, Gulyas B, Varrone A, Karlsson P, Sjoholm N, Larsson S, Jonsson C, Odh R, Sparks R, Al Tawil N, Hoffmann A, Zimmermann T, Thiele A, Halldin C
Eur J Nucl Med Mol Imaging (ISSN: 1619-7070, 1619-7089, 0340-6997), 2011 Nov; 38(11): 2058-2065.

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* Chronic cerebrospinal venous insufficiency in multiple sclerosis: clinical correlates from a multicentre study (40 views)
Bastianello S, Romani A, Viselner G, Tibaldi EC, Giugni E, Altieri M, Cecconi P, Mendozzi L, Farina M, Mariani D, Galassi A, Quattrini C, Mancini M, Brescia VM, Lagace A, Mcdonald S, Bono G, Bergamaschi R
Bmc Neurol (ISSN: 1471-2377), 2011 Oct 26; 11: 132-132.

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* Mild cognitive impairment in drug-naive patients with PD is associated with cerebral hypometabolism (69 views)
Pappata S, Santangelo G, Aarsland D, Vicidomini C, Longo K, Bronnick K, Amboni M, Erro R, Vitale C, Caprio MG, Pellecchia MT, Brunetti A, De Michele G, Salvatore M, Barone P
Neurology (ISSN: 0028-3878, 1526-632x), 2011 Oct 4; 77(14): 1357-1362.

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* Dysexecutive performance of healthy oldest old subjects on the Frontal Assessment Battery (31 views)
Iavarone A, Lorè E, De Falco C, Milan G, Mosca R, Pappata S, Galeone F, Sorrentino P, Scognamiglio M, Postiglione A
Aging Clin Exp Res (ISSN: 1594-0667, 1720-8319), 2011 Oct; 23(5-6): 351-356.

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* Extrastriatal dopamine D 2 receptor binding in Huntington's disease (87 views)
Esmaeilzadeh M, Farde L, Karlsson P, Varrone A, Halldin C, Waters S, Tedroff J
Hum Brain Mapp (ISSN: 1065-9471), 2011 Oct; 32(10): 1626-1636.

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* Imaging of the striatal and extrastriatal dopamine transporter with 18F-LBT-999: Quantification, biodistribution, and radiation dosimetry in nonhuman primates (128 views)
Varrone A, Stepanov V, Nakao R, Toth M, Gulyas B, Emond P, Deloye JB, Vercouillie J, Stabin MG, Jonsson C, Guilloteau D, Halldin C
Journal Of Nuclear Medicine (ISSN: 0161-5505, 1535-5667, 1535-5667electronic), 2011 Sep 1; 52(8): 1313-1321.

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* Neuroprotective features of carnosine in oxidative driven diseases (62 views)
Bellia F, Vecchio G, Cuzzocrea S, Calabrese V, Rizzarelli E
Molecular Aspects Of Medicine (ISSN: 1872-9452, 0098-2997), 2011 Sep; 32(4-6): 258-266.

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* The "eye of the tiger" sign in pure akinesia with gait freezing (38 views) (PDF 56 views)
Erro R, Amboni M, Vitale C, Longo K, Rocco M, Russo C, Pappata S, Brunetti A, Barone P
Neurol Sci (ISSN: 1590-1874, 1590-3478), 2011 Sep; 32(4): 703-705.

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* Age and disease related changes in the translocator protein (TSPO) system in the human brain: Positron emission tomography measurements with [11C]vinpocetine (85 views)
Gulyas B, Vas A, Toth M, Takano A, Varrone A, Cselenyi Z, Schain M, Mattsson P, Halldin C
Neuroimage (ISSN: 1053-8119, 1053-8119linking), 2011 Jun 1; 56(3): 1111-1121.

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* An MRI digital brain phantom for validation of segmentation methods (98 views) (PDF 253 views)
Alfano B, Comerci M, Larobina M, Prinster A, Hornak JP, Selvan SE, Amato U, Quarantelli M, Tedeschi G, Brunetti A, Salvatore M
Med Image Anal (ISSN: 1361-8415, 1361-8423, 1361-8415linking), 2011 Jun; 15(3): 329-339.

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* Progression of striatal and extrastriatal degeneration in multiple system atrophy: a longitudinal diffusion-weighted MR study (69 views)
Pellecchia MT, Barone P, Vicidomini C, Mollica C, Salvatore E, Ianniciello M, Liuzzi R, Longo K, Picillo M, De Michele G, Filla A, Brunetti A, Salvatore M, Pappata S
Mov Disord (ISSN: 1531-8257, 0885-3185), 2011 Jun; 26(7): 1303-1309.

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* Regional cerebral glucose metabolism after pridopidine (ACR16) treatment in patients with huntington disease (45 views)
Esmaeilzadeh M, Kullingsjo J, Ullman H, Varrone A, Tedroff J
Clin Neuropharmacol (ISSN: 0362-5664), 2011 May; 34(3): 95-100.

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* Predictive factors of neutralizing antibodies development in relapsing-remitting multiple sclerosis patients on interferon Beta-1b therapy (40 views) (PDF 53 views)
Lanzillo R, Orefice G, Prinster A, Ventrella G, Liuzzi R, Scarano V, Florio C, Vacca G, Brunetti A, Alfano B, Brescia Morra V, Bonavita V
Neurol Sci (ISSN: 1590-1874, 1590-3478), 2011 Apr; 32(2): 287-292.

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* The inorganic perspective of nerve growth factor: interactions of Cu2+ and Zn2+ with the N-terminus fragment of nerve growth factor encompassing the recognition domain of the TrkA receptor (49 views)
Travaglia A, Arena G, Fattorusso R, Isernia C, La Mendola D, Malgieri G, Nicoletti VG, Rizzarelli E
Chemistry (ISSN: 1521-3765, 0947-6539, 1521-3765electronic), 2011 Mar 21; 17(13): 3726-3738.

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* Copper(I) and Copper(II) Inhibit A beta Peptides Proteolysis by Insulin-Degrading Enzyme Differently: Implications for Metallostasis Alteration in Alzheimer's Disease (68 views)
Grasso G, Pietropaolo A, Spoto G, Pappalardo G, Tundo GR, Ciaccio C, Coletta M, Rizzarelli E
Chemistry (ISSN: 0947-6539, 1521-3765, 1521-3765electronic), 2011 Feb 25; 17(9): 2752-2762.

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* BDNF Val66Met polymorphism and brain volumes in multiple sclerosis (91 views) (PDF 60 views)
Dinacci D, Tessitore A, Russo AA, De Bonis ML, Lavorgna L, Picconi O, Sacco R, Bonavita S, Gallo A, Servillo G, Marcuccio L, Comerci M, Galletti P, Alfano B, Tedeschi G
Neurol Sci (ISSN: 1590-1874, 1590-3478, 1590-1874linking), 2011 Feb; 32(1): 117-123.

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* Novel ATP13A2 (PARK9) homozygous mutation in a family with marked phenotype variability (34 views)
Santoro L, Breedveld GJ, Manganelli F, Iodice R, Pisciotta C, Nolano M, Punzo F, Quarantelli M, Pappata S, Di Fonzo A, Oostra BA, Bonifati V
Neurogenetics (ISSN: 1364-6745, 1364-6753, 1364-6753electronic), 2011 Feb; 12(1): 33-39.

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* Quantitative analysis of [11C]AZ10419369 binding to 5-HT 1B receptors in human brain (55 views)
Varnäs K, Nyberg S, Halldin C, Varrone A, Takano A, Karlsson P, Andersson J, McCarthy D, Smith M, Pierson ME, Söderström J, Farde L
J Cereb Blood Flow Metab (ISSN: 0271-678x), 2011 Jan; 31(1): 113-123.

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* D-Amphetamine decreases [C-11]AZ10419369 receptor binding in the monkey brain (17 views)
Finnema SJ, Varrone A, Farde L, Halldin C
Journal Of Labelled Compounds & Radiopharmaceuticals (ISSN: 0362-4803), 2011; 54: N/D-N/D.

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* Quantitative measurement of [C-11]ORM-13070 receptor binding in the monkey brain using a bolus-infusion protocol (21 views)
Finnema SJ, Nakao R, Haaparanta-solin M, Varrone A, Stepanov V, Solin O, Ingman K, Sallinen J, Scheinin M, Farde L, Halldin C
Journal Of Labelled Compounds & Radiopharmaceuticals (ISSN: 0362-4803), 2011; 54: N/D-N/D.

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23 Records (19 excluding Abstracts and Conferences).
Total impact factor: 93.468 (86.122 excluding Abstracts and Conferences).
Total 5-year impact factor: 96.181 (88.125 excluding Abstracts and Conferences).



Your bibliography query: ((([btitle, keywords, abstract] BRAIN)) AND [date] >= "2011") AND [date] <= "2011 Dec 31"



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