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Query: Site:
Brain segmentation for radiation oncology application
Contact person: Marco Comerci, marco.comerciibb.cnr.it


Description ▼
This activity is focused on developing a software procedure for automated segmentation of brain structures starting from brain CTs and/or MRs.
The software must support the manual 3D drawing or importing of a lesion ROI, excluded during segmentation.
The software applies also an atlas on the segmentation, both on the Gray Matter and the White Matter and produces an RTP structure file, with contours for each slice and for each ROI.
Optionally the software can import an RT dose DICOM file with which it calculates dose-volume histograms.
The activity is aimed to develop, test, validate and improve the software and use it on the field for research purposes.

Actors ▼
Mario Quarantelli, quaranteunina.it
Marco Comerci, marco.comerciibb.cnr.it
Roberto Pacelli, roberto.pacelliibb.cnr.it
Manuel Conson, roberto.pacelliibb.cnr.it
Raffaele Liuzzi, raffaele.liuzzicnr.it
Laura Cella, laura.cellacnr.it

Keywords ▼
Brain tumor, Radiotherapy, MRI, DVH, dose, dose volume histogram, Atlas, Atlas based segmentation,

Research Areas ▼
Cancer DiseasesQuantitative Imaging

Figures ▼





Selected Papers ▼
Automated delineation of brain structures in patients undergoing radiotherapy for primary brain tumors: From atlas to dose-volume histograms (PDF restricted)
Authors: Conson MCella LPacelli RComerci MLiuzzi RSalvatore MQuarantelli M
Affiliations : *** IBB - CNR Affiliation. Department of Advanced... (more)
Journal: Radiother Oncol Elsevier Ireland Ltd (ISSN: 0167-8140... (more)
Impact factor: 4.857, 5-year impact factor: 4.67
Date: 2014 Sep, Volume: 112(3), Pages: 326-331
Paper type: Journal Article, 
Keywords: Atlas-Based Segmentation, Brain Tumors, Radiotherapy... (more)
Abstract: Purpose To implement and evaluate a magnetic res... (more)
References: Lawrence, Y.R., Li, X.A., El Naqa, I., Radiation dose... (more)
Url: http://www.scopus.com/inward/r ... 740fbb25f59382481322dffa8

Related Activities ▼
Relaxometry based MRI brain segmentation (2124 views)
Relaxometry based MRI limb segmentation (1445 views)
Software development of digital MRI brain phantom (3094 views)
Partial Volume Effect Correction software maintenance (130 views)
Drug Delivery (202 views)

Related Papers ▼
Automated delineation of brain structures in patients undergoing radiotherapy for primary brain tumors: From atlas to dose-volume histograms (restricted access) (168 views)

Related bibliography▼
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* Cerebral Involvement in Stargardt's Disease: A VBM and TBSS Study (58 views)
Gaia O, Melillo P, Sirio C, D'Alterio FM, Prinster A, Testa F, Brunetti A, Simonelli F, Quarantelli M
Invest Ophthalmol Vis Sci (ISSN: 1552-5783electronic, 0146-0404linking), 2015 Nov; 56(12): 7388-7397.

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* Neuroprotective Effect of VEGF-Mimetic Peptide QK in Experimental Brain Ischemia Induced in Rat by Middle Cerebral Artery Occlusion (55 views)
Pignataro G, Ziaco B, Tortiglione A, Gala R, Cuomo O, Vinciguerra A, Lapi D, Mastantuono T, Anzilotti S, D'Andrea LD, Pedone C, Di Renzo G, Annunziato L, Cataldi M
Acs Chem Neurosci (ISSN: 1948-7193electronic, 1948-7193linking), 2015 Sep 16; 6(9): 1517-1525.

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* Measurement of [123I]FP-CIT binding to the dopamine transporter (DAT) in healthy mouse striatum using dedicated small animal SPECT imaging: feasibility, optimization and validation (68 views)
Greco A, Zannetti A, Pappata S, Albanese A, Coda ARD, Ragucci M, Nardelli A, Brunetti A, Cuocolo A, Salvatore M
Q J Nucl Med Mol Imaging (ISSN: 1824-4785linking, 1824-4785print, 1827-1936electronic), 2015 Sep 1; N/D: N/D-N/D.

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* A Cochrane review on brain [(1)(8)F]FDG PET in dementia: limitations and future perspectives (37 views)
Morbelli S, Garibotto V, Van De Giessen E, Arbizu J, Chetelat G, Drezgza A, Hesse S, Lammertsma AA, Law I, Pappata S, Payoux P, Pagani M
Eur J Nucl Med Mol Imaging (ISSN: 1619-7089electronic, 1619-7070linking, 1619-7070print), 2015 Sep; 42(10): 1487-1491.

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* Modifications of resting state networks in spinocerebellar ataxia type two (73 views)
Cocozza S, Sacca F, Cervo A, Marsili A, Russo CV, Giorgio SM, De Michele G, Filla A, Brunetti A, Quarantelli M
Mov Disord (ISSN: 0885-3185, 1531-8257), 2015 Sep; 30(10): 1382-1390.

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* A Novel Multiparametric Approach to 3D Quantitative MRI of the Brain (188 views) (PDF 88 views)
Palma G, Tedeschi E, Borrelli P, Cocozza S, Russo C, Liu S, Ye Y, Comerci M, Alfano B, Salvatore M, Haacke EM, Mancini M
Plos One (ISSN: 1932-6203electronic, 1932-6203linking), 2015 Aug 18; 10(8): e0134963-e0134963.

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* Monomeric ss-amyloid interacts with type-1 insulin-like growth factor receptors to provide energy supply to neurons (66 views)
Giuffrida ML, Tomasello MF, Pandini G, Caraci F, Battaglia G, Busceti C, Di Pietro P, Pappalardo G, Attanasio F, Chiechio S, Bagnoli S, Nacmias B, Sorbi S, Vigneri R, Rizzarelli E, Nicoletti F, Copani A
Frontiers In Cellular Neuroscience (ISSN: 1662-5102electronic, 1662-5102linking), 2015 Aug 7; 9(AUGUST): 297-297.

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* Head and Neck Veins of the Mouse. A Magnetic Resonance, Micro Computed Tomography and High Frequency Color Doppler Ultrasound Study (145 views) (PDF 73 views)
Mancini M, Greco A, Tedeschi E, Palma G, Ragucci M, Bruzzone MG, Coda ARD, Torino E, Scotti A, Zucca I, Salvatore M
Plos One (ISSN: 1932-6203electronic, 1932-6203linking), 2015 Jun 11; 10(6): e0129912-e0129912.

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* Relationship between simultaneously acquired resting-state regional cerebral glucose metabolism and functional MRI: a PET/MR hybrid scanner study (36 views)
Aiello M, Salvatore E, Cachia A, Pappata S, Cavaliere C, Prinster A, Nicolai E, Salvatore M, Baron JC, Quarantelli M
Neuroimage (ISSN: 1053-8119linking), 2015 Jun; 113: 111-121.

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* Sniffin' Sticks and olfactory system imaging in patients with Kallmann syndrome (65 views)
Ottaviano G, Cantone E, D'Errico A, Salvalaggio A, Citton V, Scarpa B, Favaro A, Sinisi AA, Liuzzi R, Bonanni G, Di Salle F, Elefante A, Manara R, Staffieri A, Martini A, Brunetti A
Int Forum Allergy Rhinol (ISSN: 2042-6984electronic, 2042-6976), 2015 May 7; 5(9): 855-861.

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* Apathy and striatal dopamine transporter levels in de-novo, untreated Parkinson's disease patients (44 views)
Santangelo G, Vitale C, Picillo M, Cuoco S, Moccia M, Pezzella D, Erro R, Longo K, Vicidomini C, Pellecchia MT, Amboni M, Brunetti A, Salvatore M, Barone P, Pappata S
Parkinsonism Relat Disord (ISSN: 1353-8020, 1873-5126, 1353-8020linking), 2015 May; 21(5): 489-493.

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* Efficacy of dopamine agonist treatment in delayed-onset parkinsonism due to midbrain hemorrhage (23 views)
Peluso S, De Rosa A, Antenora A, Lieto M, Criscuolo C, Barbieri F, Pappata S, De Michele G
Parkinsonism Relat Disord (ISSN: 1353-8020, 1873-5126, 1873-5126electronic), 2015 Feb; 21(2): 156-158.

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* Is avolition in schizophrenia associated with a deficit of dorsal caudate activity? A functional magnetic resonance imaging study during reward anticipation and feedback (52 views)
Mucci A, Dima D, Soricelli A, Volpe U, Bucci P, Frangou S, Prinster A, Salvatore M, Galderisi S, Maj M
Psychol Med (ISSN: 1469-8978), 2015 Jan 12; N/D: 1-14.

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* A randomized controlled pilot trial of lithium in spinocerebellar ataxia type two (66 views)
Saccà F, Puorro G, Brunetti A, Capasso G, Cervo A, Cocozza S, De Leva M, Marsili A, Pane C, Quarantelli M, Russo CV, Trepiccione F, De Michele G, Filla A, Morra VB
J Neurol (ISSN: 0340-5354, 1432-1459, 1432-1459electronic), 2015 Jan; 262(1): 149-153.

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* gH625: A milestone in understanding the many roles of membranotropic peptides (67 views)
Galdiero S, Falanga A, Morelli G, Galdiero M
Biochim Biophys Acta (ISSN: 0005-2736, 0006-3002, 0925-4439), 2015 Jan; 1848(PA): 16-25.

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* Is 2-deoxy-2-[(18)F]fluoro-D-glucose PET/CT acquisition from the upper thigh to the vertex of skull useful in oncological patients? (38 views)
Salvatore B, Caprio MG, Fonti R, D'Amico D, Fraioli F, Salvatore M, Pace L
Transl Med Unisa (ISSN: 2239-9747, 2239-9747electronic, 2239-9747linking), 2015 Jan; 11(6): 34-38.

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* Nuclear medicine and the emergency department patient: an illustrative case-based approach (85 views)
Behnia F, Gross JA, Ragucci M, Monti S, Mancini M, Elman S, Vesselle H, Mannelli L
Radiol Med (ISSN: 1826-6983, 0033-8362, 1826-6983electronic), 2015 Jan; 120(1): 158-170.

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* Semax, an ACTH4-10 peptide analog with high affinity for copper(II) ion and protective ability against metal induced cell toxicity (78 views)
Tabbì G, Magrì A, Giuffrida A, Lanza V, Pappalardo  G, Naletova I, Nicoletti VG, Attanasio F, Rizzarelli E
J Chem Res (ISSN: 1873-3344, 0162-0134, 0162-0134print), 2015 Jan; 142: 39-46.

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* A multiparametric and multiscale approach to automated segmentation of brain veins (65 views) (PDF 71 views)
Monti S, Palma G, Borrelli P, Tedeschi E, Cocozza S, Salvatore M, Mancini M
Proceedings Of Engineering In Medicine And Biology Society, 2015; N/D: 3041-3044.

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* AN INTERIM ANALYSIS ON SUSCEPTIBILITY TO VASCULAR ALTERATIONS IN MS AND ALS (67 views)
Postiglione E, Criscuolo C, Cianflone A, Lanzillo R, Mancini M, Tedeschi E, Liuzzi R, Vacca G, Vastola M, Capasso M, Mancino T, Mormile R, Passannanti A, Palma G, Caprio M, Incoronato M, Salvatore M, Brescia-Morra V
Veins And Lymphatics (ISSN: 2279-7483), 2015; 4(s1): 21-22.

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* ASSESSING THE CORRELATION BETWEEN IRON DEPOSIT IN THE BASAL GANGLIA AND FLOW ABNORMALITIES IN THE NECK VEINS WITH MRI: PRELIMINARY EXPERIENCE (59 views)
Canna A, Palma G, Tedeschi E, Cocozza S, Lanzillo R, Russo C, Borrelli P, Postiglione E, Liuzzi R, Criscuolo C, Brescia-Morra V, Mancini M, Salvatore M
Veins And Lymphatics (ISSN: 2279-7483), 2015; 4(s1): 20-21.

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* Lesion load may predict long-term cognitive dysfunction in multiple sclerosis patients (54 views)
Patti F, De Stefano M, Lavorgna L, Messina S, Chisari CG, Ippolito D, Lanzillo R, Vacchiano V, Realmuto S, Valentino P, Coniglio G, Buccafusca M, Paolicelli D, D'Ambrosio A, Montella P, Morra VB, Savettieri G, Alfano B, Gallo A, Simone I, Viterbo R, Zappia M, Bonavita S, Tedeschi G
Plos One (ISSN: 1932-6203, 1932-6203electronic), 2015; 10(3): N/D-N/D.

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* Mapping the brain by a new multiparametric quantitative MRI method (72 views)
Palma G, Tedeschi E, Borrelli P, Cocozza S, Russo C, Canna A, Comerci M, Alfano B, Mancini M
Rsna 101st Scientific Assembly And Annual Meeting, 2015; N/D: N/D-N/D.

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* MRI/MRS in neuroinflammation: methodology and applications (27 views)
Quarantelli M
Clin Transl Imaging (ISSN: 2281-5872print, 2281-5872linking), 2015; 3: 475-489.

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* MULTIPARAMETRIC AUTOMATED SEGMENTATION OF BRAIN VEINS (92 views)
Monti S, Palma G, Tedeschi E, Borrelli P, Cocozza S, Salvatore M, Mancini M
Veins And Lymphatics (ISSN: 2279-7483), 2015; 4(s1): 13-13.

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* SPG5 and multiple sclerosis: Clinical and genetic overlap? (33 views)
Criscuolo C, Carbone R, Lieto M, Peluso S, Guacci A, Filla A, Quarantelli M, Lanzillo R, Brescia Morra V, De Michele G
Acta Neurologica Scandinavica (ISSN: 0001-6314, 1600-0404), 2015; 133(6): 410-414.

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30 Records (25 excluding Abstracts and Conferences).
Total impact factor: 78.271 (78.271 excluding Abstracts and Conferences).
Total 5-year impact factor: 77.091 (77.091 excluding Abstracts and Conferences).



Your bibliography query: ((([btitle, keywords, abstract] BRAIN)) AND [date] >= "2015") AND [date] <= "2015 Dec 31"



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