Keywords: Brain Segmentation, Medical Ontology, Reasoning, Image Segmentation, Magnetic Resonance Imaging, Problem Solving, Tissue, Brain Atlas,
Affiliations: *** IBB - CNR ***
National Research Council (CNR), Biostructure and Bioimaging Institute (IBB), via Pansini 5, 80131 - Napoli, Italy
References: Fox, N.C., Freeborough, P.A., Brain atrophy progression measured from registered serial MRI: Validation and application to Allzheimer's disease (1997) J. Magn. Reson Imaging, 1069-107
Smith, S.M., De Stefano, N., Jenkinson, M., Matthews, P.M., Normalized accurate measurement of longitudinal brain change (2001) J. Comput. Assist.Tomogr, 25, pp. 466-475
Alfano, B., Brunetti, A., Covelli, E.M., Unsupervised, automated segmentation of normal brain using multispectral relaxometric Magnetic Resonance approach (1997) Magn. Reson. Med, 37, pp. 84-93
Gruber, T., A translation approach to portable ontology specifications (1993) Knowledge acquisitions, 5 (2), pp. 199-220
Rosse, C., Mejino, J.L.V., A Reference Ontology for Bioinformatics: The Foundational Model of Anatomy (2003) Journal of Biomedical Informatics, 36, pp. 478-500
Rector, A.L., Rogers, J.E., Zanstra, P.E., Van Der Haring, E., OpenGALEN: Open Source Medical Terminology and Tools (2003) Proc AMIA Symp, p. 982
Humphreys, B., Lindberg, D., The UMLS project: Making the conceptual connection between users and the information they need (1993) Bulletin of the Medical Library Association, 81 (2), pp. 170-177
Golbeck, J., Fragoso, G., Hartel, F., Hendler, J., Parsia, B., Oberthaler, J., The national cancer institute's thesaurus and ontology (2003) Journal of Web Semantics, 1
Hu, B., Dasmahapatra, S., Dupplaw, D., Lewis, P., Shadbolt, N., Reflections on a medical ontology (2007) International Journal of Human-Computer Studies, 65 (7)
Moretti, B., Fadili, J.M., Ruan, S., Bloyet, D., Mazoyer, B., Phantom-based performance evaluation: Application to brain segmentation from magnetic resonance images (2000) Medical Image Analysis, 4, pp. 303-316
Chalana, V., Ng, L., Rystrom, L.R., Gee, J.C., Haynor, D.R., Validation of brain segmentation and tissue classification algorithm for T1-weighted MR images (2001) Proceedings of SPIE. Medical Imaging 2001: Image Processing, 4322, pp. 1873-1882. , Sonka, M, Hanson, K, eds
Kaus, M.R., Warfield, S.K., Nabavi, A., Black, P.M., Jolesz, F.A., Kikinis, R., Automated Segmentation of MR Images of Brain Tumors (2001) Radiology, 218, pp. 586-591
Comerci, M., Larobina, M., Prinster, A., Ciscognetti, N., Quarantelli, M., Brunetti, A., Salvatore, M., Alfano, B., MRI Brain study simulation (2007) Proceedings of ISMRM 2007. EPOS, 3698. , May 19-25 Berlin
McGuinness, D.L., van Harmelen, F.: OWL Web Ontology Language Overview. W3C Recommendation 10, (February 2004), Latest version is available at http://www.w3c.org/TR/owl-features/Horrocks, I., Patel-Schneider, P.F, Boley, H., Tabet, S., Grosof, B., Dean, M.: SWRL: A Semantic Web Rule Language Combining OWL and RuleML, W3C Member Submission (May 21, 2004) Latest version is available at http://www.w3.org/Submission/SWRL/KAON2, http://kaon2.semanticweb.org/Prud'hommeaux, E., Seaborne, A.: SPARQL: Query Language for RDF. W3C Candidate Recommendation (June 14, 2007), Latest version is available at http://www.w3.org/TR/rdf-sparql-query/UR - http://www.scopus.com/inward/record.url?eid=2-s2.0-38349109674&partnerID=40&md5=2c4c2b3d9815e043fa9e3a482438a11c
Fox, N. C., Freeborough, P. A., Brain atrophy progression measured from registered serial MRI: Validation and application to Allzheimer's disease (1997) J. Magn. Reson Imaging, 1069-107
Smith, S. M., De Stefano, N., Jenkinson, M., Matthews, P. M., Normalized accurate measurement of longitudinal brain change (2001) J. Comput. Assist. Tomogr, 25, pp. 466-475
Rector, A. L., Rogers, J. E., Zanstra, P. E., Van Der Haring, E., OpenGALEN: Open Source Medical Terminology and Tools (2003) Proc AMIA Symp, p. 982
Kaus, M. R., Warfield, S. K., Nabavi, A., Black, P. M., Jolesz, F. A., Kikinis, R., Automated Segmentation of MR Images of Brain Tumors (2001) Radiology, 218, pp. 586-591
McGuinness, D. L., van Harmelen, F.: OWL Web Ontology Language Overview. W3C Recommendation 10, (February 2004), Latest version is available at http: //www. w3c. org/TR/owl-features/Horrocks, I., Patel-Schneider, P. F, Boley, H., Tabet, S., Grosof, B., Dean, M.: SWRL: A Semantic Web Rule Language Combining OWL and RuleML, W3C Member Submission (May 21, 2004) Latest version is available at http: //www. w3. org/Submission/SWRL/KAON2, http: //kaon2. semanticweb. org/Prud'hommeaux, E., Seaborne, A.: SPARQL: Query Language for RDF. W3C Candidate Recommendation (June 14, 2007), Latest version is available at http: //www. w3. org/TR/rdf-sparql-query/UR - http: //www. scopus. com/inward/record. url? eid=2-s2. 0-38349109674&partnerID=40&md5=2c4c2b3d9815e043fa9e3a482438a11c
An ontology-based technique for validation of MRI brain segmentation methods
Antonini A, Vitale C, Barone P, Cilia R, Righini A, Bonuccelli U, Abbruzzese G, Ramat S, Petrone A, Quatrale R, Marconi R, Ceravolo R, Stefani A, Lopiano L, Zappia M, Capus L, Morgante L, Tamma F, Tinazzi M, Colosimo C, Guerra UP, Valzania F, Fagioli G, Distefano A, Bagnato A, Feggi L, Anna S, Maria Teresa Rosaria De Cr, Nobili F, Mazzuca N, Baldari S, Eleopra R, Bestetti A, Benti R, Varrone A, Volterrani D, Massa R, Stocchi F, Schillaci O, Dore F, Zibetti M, Castellano G, Battista SG, Giorgetti G * The relationship between cerebral vascular disease and parkinsonism: The VADO study(498 views) Parkinsonism Relat D (ISSN: 1353-8020, 1873-5126, 1873-5126electronic), 2012; 18(6): 775-780. Impact Factor:3.274 ViewExport to BibTeXExport to EndNote
Malvindi MA, Greco A, Conversano F, Figuerola A, Corti M, Bonora M, Lascialfari A, Doumari HA, Moscardini M, Cingolani R, Gigli G, Casciaro S, Pellegrino T, Ragusa A * MR Contrast Agents(292 views) Small Animal Imaging, 2011 Jul 8; 21(13): 2548-2555. Impact Factor:1.784 ViewExport to BibTeXExport to EndNote
Ntziachristos V, Cuénod CA, Fournier L, Balvay D, Pradel C, Siauve N, Clement O, Jouannot E, Lucidarme O, Vecchio SD, Salvatore M, Law B, Tung C-H, Jain RK, Fukumura D, Munn LL, Brown EB, Schellenberger E, Montet X, Weissleder R, Clerck ND, Postnov A * Tumor Imaging(350 views) Textbook Of In Vivo Imaging In Vertebrates (ISSN: 9780-4700), 2007 Jul 16; 1: 277-309. Impact Factor:1.148 ViewExport to BibTeXExport to EndNote
Hesse B, Tagil K, Cuocolo A, Anagnostopoulos C, Bardies M, Bax J, Bengel F, Busemann Sokole E, Davies G, Dondi M, Edenbrandt L, Franken P, Kjaer A, Knuuti J, Lassmann M, Ljungberg M, Marcassa C, Marie PY, Mckiddie F, O'connor M, Prvuolovich E, Underwood R * 3. 0 T perfusion MR imaging(730 views) Rivista Di Neuroradiologia (ISSN: 1120-9976), 2004; 17(6): 807-812. Impact Factor:0.023 ViewExport to BibTeXExport to EndNote