The effect of methylation on the excited state dynamics of aminouracils
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The effect of methylation on the excited state dynamics of aminouracils
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617 views
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Gustavsson T,
Improta R
, Banyasz A, Vaya I, Markovitsi D
J Photochem Photobiol A Chem (ISSN: 1010-6030)
,
2012 Apr 15;
234: 37-43.
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Paper type:
Journal Article,
Impact factor:
2.416,
5-year impact factor:
2.691
Url:
http://www.scopus.com/inward/record.url?eid=2-s2.0-84859538922&partnerID=40&md5=898683f4b373b5ad4d870d0e959a0cd9
Keywords:
Dna, Excited State, Femtosecond, Fluorescence Upconversion, Nucleobases, Td-Dft, Time-Resolved Fluorescence,
Affiliations:
*** IBB - CNR ***
CNRS, IRAMIS, URA 2453, 91191 Gif-sur-Yvette, France
Istituto Biostrutture e Bioimmagini, CNR, Via Mezzocannone 16, I-80134 Napoli, Italy
References:
Not available.
The effect of methylation on the excited state dynamics of aminouracils
The excited state properties of two amino substituted uracils, 5-aminouracil (5AU) and 5-dimethylaminouracil (5DMAU) have been studied by steady-state and time-resolved fluorescence spectroscopy. In addition, the electronic transitions corresponding to photon absorption and emission were calculated using the TD-DFT/PCM method (with PBE0 and CAM-B3LYP functionals), explicitly including water molecules of the first solvent shell. The fluorescence decays, recorded by fluorescence upconversion, reveal that the emitting states of both molecules are substantially longer-lived than that of uracil. However, while the 5AU fluorescence decays on a picosecond timescale, the 5DMAU fluorescence contains a weak, long-lived component, continuing beyond 100 ps. Calculations show that the excited state deactivation of 5AU is governed by the existence of a minimum on the ππ* excited state potential energy surface. For 5DMAU, on the other hand, a very long-lived but weakly fluorescent intramolecular charge transfer (ICT) state, involving a significant charge transfer between the dimethylamino group and the pyrimidine ring, is found. This stable ICT state is characterized by a rotation of the dimethylamino group towards a quasi-perpendicular geometry. © 2012 Elsevier B.V. All rights reserved.
The effect of methylation on the excited state dynamics of aminouracils
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The effect of methylation on the excited state dynamics of aminouracils
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, Barone V
*
PCM/TD-DFT study of the two lowest excited states of uracil derivatives in solution: The effect of the functional and of the cavity model
(
435 views
)
J Mol Struct Theochem (ISSN: 0166-1280)
,
2009 Nov 30;
914(1-3): 87-93.
Impact Factor:
1.216
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Angeli C,
Improta R
, Santoro F
*
On the controversial nature of the 1 B-1(u) and 2 B-1(u) states of trans-stilbene: The n-electron valence state perturbation theory approach
(
426 views
)
J Chem Phys (ISSN: 0021-9606, 0897-690online, 0021-9606printed)
,
2009 May 7;
130(17): N/D-N/D.
Impact Factor:
3.093
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Karunakaran V, Kleinermanns K,
Improta R
, Kovalenko SA
*
Photoinduced dynamics of guanosine monophosphate in water from broad-band transient absorption spectroscopy and quantum-chemical calculations
(
428 views
)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126)
,
2009;
131(16): 5839-5850.
Impact Factor:
8.58
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Santoro F, Barone V,
Improta R
*
The Excited States Decay Of The A-T Dna: A Pcm/Td-Dft Study In Aqueous Solution Of The (9-Methyl-Adenine) 2 (1-Methyl-Thymine) 2 Stacked Tetramer
(
380 views
)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126)
,
2009;
131(42): 15232-15245.
Impact Factor:
8.58
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Mercier Y, Santoro F, Reguero M,
Improta R
*
The decay from the dark nπ* excited state in uracil: An integrated CASPT2/CASSCF and PCM/TD-DFT study in the gas phase and in water
(
522 views
)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic)
,
2008 Sep 4;
112(35): 10769-10772.
Impact Factor:
4.189
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Banyasz A, Gustavsson T, Keszei E,
Improta R
, Markovitsi D
*
Effect of amino substitution on the excited state dynamics of uracil
(
544 views
)
Photochem Photobiol Sci (ISSN: 1474-905x)
,
2008 Jul;
7(7): 765-768.
Impact Factor:
2.144
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Improta R
, Barone V
The excited states of adenine and thymine nucleoside and nucleotide in aqueous solution: A comparative study by time-dependent DFT calculations
(
380 views
)
Theor Chem Acc (ISSN: 1432-881x)
,
2008 Jul;
120(4-6): 491-497.
Impact Factor:
2.37
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Gustavsson T, Bányász A, Sarkar N, Markovitsi D,
Improta R
*
Assessing solvent effects on the singlet excited state lifetime of uracil derivatives: A femtosecond fluorescence upconversion study in alcohols and D2O
(
412 views
)
Chem Phys (ISSN: 0301-0104)
,
2008 Jun 23;
350(1-3): 186-192.
Impact Factor:
1.961
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Gustavsson T, Banyasz A, Sarkar N, Markovitsi D,
Improta R
*
Statin: New life for an old drug
(
603 views
)
Pharmacol Res Academic Press
,
2008 Jun 23;
350(1-3): 1-2.
Impact Factor:
3.976
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Santoro F, Barone V,
Improta R
*
Can TD-DFT calculations accurately describe the excited states behavior of stacked nucleobases? The cytosine dimer as a test case
(
475 views
)
J Comput Chem (ISSN: 0192-8651, 1096-987xelectronic, 0192-8651linking)
,
2008 Apr 30;
29(6): 957-964.
Impact Factor:
3.39
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Improta R
The Excited States Of Pi-Stacked 9-Methyl Adenine Oligomers: A Td-Dft Study In Aqueous Solution
(
283 views
)
Physical Chemistry Chemical Physics
,
2008;
10: 2656-2664.
Impact Factor:
2.028
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Staiano M, Saviano M, Herman P, Grycznyski Z, Fini C, Varriale A, Parracino A, Kold AB, Rossi M, D'Auria S
*
Time-resolved fluorescence spectroscopy and molecular dynamics simulations point out the effects of pressure on the stability and dynamics of the porcine odorant-binding protein
(
1152 views
)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print)
,
2008;
89(4): 284-291.
Impact Factor:
2.823
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Santoro F, Barone V, Benzi C,
Improta R
*
Excited state properties of sizable molecules in solution: From structure to reactivity
(
388 views
)
Theor Chem Acc (ISSN: 1432-881x)
,
2007 May;
117(5-6): 1073-1084.
Impact Factor:
2.537
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Santoro F, Gustavsson T, Lami S, Barone V,
Improta R
*
Towards the understanding of the excited state dynamics of nucleic acids: Solvent and stacking effect on the photophysical behavior of nucleobases
(
528 views
)
Aip Conf Proc (ISSN: 0094-243x)
,
2007;
963(2): 631-634.
Impact Factor:
0
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Santoro F, Barone V, Gustavsson T,
Improta R
*
Solvent effect on the singlet excited-state lifetimes of nucleic acid bases: A computational study of 5-fluorouracil and uracil in acetonitrile and water
(
1295 views
)
J Am Chem Soc (ISSN: 0002-7863, 0002-2786, 1520-5126)
,
2006 Dec 20;
128(50): 16312-16322.
Impact Factor:
7.696
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Gustavsson T, Sarkar N, Lazzarotto E, Markovitsi D,
Improta R
*
Singlet excited state dynamics of uracil and thymine derivatives: A femtosecond fluorescence upconversion study in acetonitrile
(
392 views
)
Chem Phys Lett (ISSN: 0009-2614)
,
2006 Oct 5;
429(4-6): 551-557.
Impact Factor:
2.462
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Improta R
, Barone V, Scalmani G, Frisch MJ
*
A state-specific polarizable continuum model time dependent density functional theory method for excited state calculations in solution
(
520 views
)
J Chem Phys (ISSN: 0021-9606, 0897-690online)
,
2006 Sep 7;
125(5): N/D-N/D.
Impact Factor:
3.166
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Nuernberger P, Vogt G, Gerber G,
Improta R
, Santoro F
*
Femtosecond study on the isomerization dynamics of NK88. I. Ground-state dynamics after photoexcitation
(
558 views
)
J Chem Phys (ISSN: 0021-9606, 0021-9606print, 0897-690online)
,
2006 Jul 28;
125(4): 44512-44544.
Impact Factor:
3.247
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Vogt G, Nuernberger P, Gerber G,
Improta R
, Santoro F, Nuernberger P, Vogt G, Gerber G,
Improta R
, Santoro F
*
Femtosecond study on the isomerization dynamics of NK88. II. Excited-state dynamics
(
478 views
)
J Chem Phys (ISSN: 0021-9606, 0897-690online)
,
2006 Jul 28;
125(4): 44512-44512.
Impact Factor:
3.166
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Gustavsson T, Sarkar N, Lazzarotto E, Markovitsi D, Barone V,
Improta R
*
Solvent effect on the singlet excited-state dynamics of 5-fluorouracil in acetonitrile as compared with water
(
468 views
)
J Phys Chem B (ISSN: 1520-6106, 1520-5207, 1520-5207electronic)
,
2006 Jul 6;
110(26): 12843-12847.
Impact Factor:
4.115
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Gustavsson T, Lazzarotto E, Markovitsi D, Banyasz AA,
Improta R
, Scalmani G
*
A combined femtosecond fluorescence and TD-DFT study of uracil derivatives in aqueous solution
(
502 views
)
Femtochemistry Vii Elsevier (ISSN: 9780-4445)
,
2006;
N/D: 254-257.
Impact Factor:
0
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Improta R
, Barone V, Scalmani G, Frisch MJ
*
A State-Specific Pcm Td-Dft Method For Equilibrium And Non-Equilibrium Excited State Calculations In Solution
(
551 views
)
J Chem Phys (ISSN: 0897-690online, 0021-9606printed)
,
2006;
125(5): 54103-54103.
Impact Factor:
3.093
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70
Records (
65
excluding Abstracts).
Total impact factor:
401.284
(
387.717
excluding Abstracts).
Total 5 year impact factor:
398.96
(
385.183
excluding Abstracts).
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