The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics(708 views) Giordano D, Boechi L, Vergara A, Marti MA, Samuni U, Dantsker D, Grassi L, Estrin DA, Friedman JM, Mazzarella L, Di Prisco G, Verde C
Institute of Protein Biochemistry, CNR, Via Pietro Castellino 111, I-80131 Naples, Italy
Departamento de Química Inorgánica, Analítica y Química Física, INQUIMAE-CONICET, Facultad de Ciencias Exactas y Naturales, Argentina
Department of Chemistry, University of Naples 'Federico II', Naples, Italy
Department of Physiology and Biophysics, Albert Einstein College of Medicine, Bronx, NY, United States
Departamento de Qu mica Inorg nica, Anal tica y Qu mica F sica, INQUIMAE-CONICET, Facultad de Ciencias Exactas y Naturales, Argentina
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Eastman, J. T., (1993) Antarctic Fish Biology: Evolution in A Unique Environment., , Academic Press, San Diego, CA
Eastman, J. T., Aspects of the morphology of phyletically basal bovichtid fishes of the Antarctic suborder Notothenioidei (Perciformes) (2006) Polar Biol, 29, pp. 754-763
Perutz, M. F., Myoglobin and haemoglobin: Role of distal residues in reactions with haem ligands (1989) Trends Biochem Sci, 14, pp. 42-44
Eastman, J. T., McCune, A. R., Fishes on the Antarctic continental shelf: Evolution of a marine species flock? (2000) J Fish Biol, 57, pp. 84-102
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ali, A., Blundell, T. L., Comparative protein modelling by satisfaction of spatial restraints (1993) J Mol Biol, 234, pp. 779-815
Pearlman, D. A., Case, D. A., Caldwell, J. W., Ross, W. R., Cheatham Iii., T. E., Debolt, S., Ferguson, D., Kollman, P., AMBER, a computer program for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to elucidate the structures and energies of molecules (1995) Comp Phys Commun, 91, pp. 1-41
Nadra, A. D., Mart, M. A., Pesce, A., Bolognesi, M., Estrin, D. A., Exploring the molecular basis of heme coordination in human neuroglobin (2008) Proteins Str Func Bionf, 71, pp. 695-705
The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics
The dominant perciform suborder Notothenioidei is an excellent study group for assessing the evolution and functional importance of biochemical adaptations to temperature. The availability of notothenioid taxa in a wide range of latitudes (Antarctic and non-Antarctic) provides a tool to enable identification of physiological and biochemical characteristics gained and lost during evolutionary history. Non-Antarctic notothenioids belonging to the most basal families are a crucial source for understanding the evolution of hemoglobin in high-Antarctic cold-adapted fish. This paper focuses on the structure, function and evolution of the oxygen-transport system of Cottoperca gobio, a sub-Antarctic notothenioid fish of the family Bovichtidae, probably derived from ancestral species that evolved in the Antarctic region and later migrated to lower latitudes. Unlike most high-Antarctic notothenioids, but similar to many other acanthomorph teleosts, C. gobio has two major hemoglobins having the beta chain in common. The oxygen-binding equilibria and kinetics of the two hemoglobins have been measured. Hb1 and Hb2 show strong modulation of oxygen-binding equilibria and kinetics by heterotropic effectors, with marked Bohr and Root effects. In Hb1 and Hb2, oxygen affinity and subunit cooperativity are slightly higher than in most high-Antarctic notothenioid hemoglobins. Hb1 and Hb2 show similar rebinding rates, but also show significant dynamic differences that are likely to have functional consequences. Molecular dynamic simulations of C. gobio Hb1 were performed on the dimeric protein in order to obtain a better understanding of the molecular basis of structure/function relationships.
The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics
No results.
The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics