MAVEN: An Algorithm for Multi-Parametric Automated Segmentation of Brain Veins from Gradient Echo Acquisitions (190 views visite) (PDF public pubblico 181 views visite)
Ieee T Med Imaging (ISSN: 0278-0062), 2017; 36(5): 1054-1065.
Export to Esporta in BibTeX Export to Esporta in EndNote
Paper type Tipo di articolo: Journal Article,
Impact factor: 6.131, 5-year impact factor Impact factor a 5 anni: 5.546
Url: https://www.scopus.com/inward/record.uri?eid=2-s2.0-85019170931&doi=10.1109%2fTMI.2016.2645286&partnerID=40&md5=41dc962afe1356f702791a673e9ac74b
Keywords Parole chiave: Brain Veins, Mri, Segmentation, Vesselness, Automation, Image Segmentation, Magnetic Resonance Imaging, Neurodegenerative Diseases, Trees (mathematics), Algorithm Parameters, Automated Segmentation, Manual Segmentation, Neurodegenerative Disorders, Parametric Information, Quantitative And Qualitative Analysis, Traumatic Brain Injuries, Parameter Estimation, Adult, Article, False Positive Result, Female, Human, Human Experiment, Image Analysis, Multiparametric Magnetic Resonance Imaging, Neuroimaging, Normal Human, Quantitative Analysis, Reproducibility, Nuclear Magnetic Resonance Imaging, Cerebral Veins, Reproducibility Of Results,
Affiliations Affiliazioni:
*** IBB - CNR ***
IRCCS SDN, Naples, 80143, Italy
Department of Electronic, Information and Bioengineering, Politecnico di Milano, Milan, 20133, Italy
Department of Advanced Biomedical Sciences, University Federico II, Naples, 80131, Italy
Department of Medical Physics in Radiology, German Cancer Research Center, Heidelberg, 69120, Germany
Institute of Biostructure and Bioimaging, National Research Council, Naples, 80145, Italy
References Riferimenti:
Haacke, E.M., Xu, Y., Cheng, Y.-C.N., Reichenbach, J.R., Susceptibility weighted imaging (SWI) (2004) Magn. Reson. Med., 52 (3), pp. 612-618. , Se
Coutinho, J.M., Gerritsma, J.J., Zuurbier, S.M., Stam, J., Isolated cortical vein thrombosis: Systematic review of case reports and case series (2014) Stroke, 45 (6), pp. 1836-1838
Chen, S., Venous system in acute brain injury: Mechanisms of pathophysiological change and function (2015) Exp. Neurol., 272, pp. 4-10. , Oct
Toro, E.F., Brain venous haemodynamics, neurological diseases and mathematical modelling. A review (2016) Appl. Math. Comput., 272, pp. 542-579. , Jan
Beggs, C.B., Venous hemodynamics in neurological disorders: An analytical review with hydrodynamic analysis (2013) BMC Med., 11 (1), p. 142
Adams, C.W., Abdulla, Y.H., Torres, E.M., Poston, R.N., Periventricular lesions in multiple sclerosis: Their perivenous origin and relationship to granular ependymitis (1987) Neuropathol. Appl. Neurobiol., 13 (2), pp. 141-152
De Simone, R., Ranieri, A., Montella, S., Marchese, M., Bonavita, V., Sinus venous stenosis-associated idiopathic intracranial hypertension without papilledema as a powerful risk factor for progression and refractoriness of headache (2012) Current Pain Headache Rep., 16 (3), pp. 261-269. , Jun
Saposnik, G., Diagnosis and management of cerebral venous thrombosis: A statement for healthcare professionals from the American Heart Association/American stroke association (2011) Stroke, 48 (2), pp. 1158-1192
Tsai, F.Y., Kostanian, V., Rivera, M., Lee, K.-W., Chen, C.C., Nguyen, T.H., Cerebral venous congestion as indication for throm-bolytic treatment (2007) CardioVascular Intervent. Radiol., 30 (4), pp. 675-687. , Jul
Brown, W.R., Thore, C.R., Review: Cerebral microvascular pathology in ageing and neurodegeneration (2011) Neuropathol. Appl. Neurobiol., 37 (1), pp. 56-74. , Feb
Bateman, G., The pathophysiology of idiopathic normal pressure hydro-cephalus: Cerebral ischemia or altered venous hemodynamics? (2008) AJNR Amer. J. Neuroradiol., 29 (1), pp. 198-203
Yan, S., Increased visibility of deep medullary veins in leukoaraio-sis: A 3-T MRI study (2014) Front Aging Neurosci., 6, p. 144. , Sep
Moody, D.M., Brown, W.R., Challa, V.R., Anderson, R.L., Periventricular venous collagenosis: Association with leukoaraiosis (1995) Radiol., 194 (2), pp. 469-476
Kau, T., The 'central vein sign': Is there a place for susceptibility weighted imaging in possible multiple sclerosis? (2013) Eur. Radiol., 23 (7), pp. 1956-1962. , Jul
Gaitán, M.I., De Alwis, M.P., Sati, P., Nair, G., Reich, D.S., Multiple sclerosis shrinks intralesional, and enlarges extralesional, brain parenchymal veins (2013) Neurology, 80 (2), pp. 145-151
Zivadinov, R., Decreased brain venous vasculature visibility on susceptibility-weighted imaging venography in patients with multiple sclerosis is related to chronic cerebrospinal venous insufficiency (2011) BMC Neurol., 11 (1), p. 1
Haacke, E.M., Reichenbach, J.R., (2014) Susceptibility Weighted Imaging MRI: Basic Concepts and Clinical Applications, , Hoboken NJ USA: Wiley
Arrigoni, F., Deep medullary vein involvement in neonates with brain damage: An MR imaging study (2011) AJNR Amer. J. Neuroradiol., 32 (11), pp. 2030-2036
Bériault, S., Sadikot, A.F., Alsubaie, F., Drouin, S., Collins, D.L., Pike, G.B., Neuronavigation using susceptibility-weighted venography: Application to deep brain stimulation and comparison with gadolinium contrast: Technical note (2014) J. Neurosurgery, 121 (1), pp. 131-141
Nowinski, W.L., Volkau, I., Marchenko, Y., Thirunavuukarasuu, A., Ng, T.T., Runge, V.M., A 3D model of human cerebrovasculature derived from 3T magnetic resonance angiography (2009) Neuroinformatics, 7 (1), pp. 23-36
Lesage, D., Angelini, E.D., Bloch, I., Funka-Lea, G., A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes (2009) Med. Image Anal., 13 (6), pp. 819-845. , Aug
Frangi, A.F., Niessen, W.J., Vincken, K.L., Viergever, M.A., Multiscale vessel enhancement filtering (1998) Proc. MICCAI, pp. 130-137
Manniesing, R., Viergever, M.A., Niessen, W.J., Vessel enhancing diffusion: A scale space representation of vessel structures (2006) Med. Image Anal., 10 (6), pp. 815-825
Koopmans, P.J., Manniesing, R., Niessen, W.J., Viergever, M.A., Barth, M., MR venography of the human brain using susceptibility weighted imaging at very high field strength (2008) Magn. Reson. Mater. Phys., Biol. Med., 21 (1), pp. 149-158
Bériault, S., Archambault-Wallenburg, M., Sadikot, A.F., Collins, D.L., Pike, G.B., Automatic Markov random field segmentation of susceptibility-weighted MR venography (2014) Clinical Image-Based Procedures. Translational Research in Medical Imaging, pp. 39-47. , Cham, Switzerland: Springer
Monti, S., A multiparametric and multiscale approach to automated segmentation of brain veins (2015) Proc. 37th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc. (EMBC), Aug., pp. 3041-3044
Bériault, S., Xiao, Y., Collins, D.L., Pike, G.B., Automatic SWI venography segmentation using conditional random fields (2015) IEEE Trans. Med. Imag., 34 (12), pp. 2478-2491. , Dec
Xu, X., Segmentation of cerebral venous vessel in SWI based on multi-adaptive threshold with vessel enhancement and background effects elimination (2012) Proc. 6th Int. Conf. Internet Comput. Sci. Eng. (ICICSE), pp. 107-111. , Apr
Kuijf, H.J., Bouvy, W.H., Zwanenburg, J.J.M., Viergever, M.A., Biessels, G.J., Vincken, K.L., Automated detection of periven-tricular veins on 7 T brain MRI (2015) Proc. SPIE, 9413, p. 94132T
Kuijf, H.J., Quantification of deep medullary veins at 7 T brain MRI (2016) Eur. Radiol., 26 (10), pp. 3412-3418. , Oct
Monti, S., Automated multi-parametric segmentation of brain veins from GRE acquisition (2016) Proc. Int. Soc. Mag. Reson. Med., p. 1906
Smith, S.M., Fast robust automated brain extraction (2002) Human Brain Mapping, 17 (3), pp. 143-155
Cusack, R., Papadakis, N., New robust 3-D phase unwrapping algorithms: Application to magnetic field mapping and undistort-ing echoplanar images (2002) NeuroImage, 16 (3), pp. 754-764. , Jul
Schweser, F., Deistung, A., Lehr, B.W., Reichenbach, J.R., Quantitative imaging of intrinsic magnetic tissue properties using MRI signal phase: An approach to in vivo brain iron metabolism? (2011) NeuroImage, 54 (4), pp. 2789-2807. , Feb
Li, W., A method for estimating and removing streaking arti-facts in quantitative susceptibility mapping (2015) NeuroImage, 108, pp. 111-122. , Mar
Dubuisson, M.-P., Jain, A.K., A modified Hausdorff distance for object matching (1994) Proc. 12th IAPR Int. Conf. Pattern Recognit. (ICPR), 1, pp. 566-568. , Oct
Lee, T.C., Kashyap, R.L., Chu, C.N., Building skeleton models via 3-D medial surface axis thinning algorithms (1994) CVGIP, Graph. Models Image Process., 56 (6), pp. 462-478
Kerschnitzki, M., Architecture of the osteocyte network correlates with bone material quality (2013) J. Bone Mineral Res., 28 (8), pp. 1837-1845
Haacke, E.M., Tang, J., Neelavalli, J., Cheng, Y.C.N., Susceptibility mapping as a means to visualize veins and quantify oxygen saturation (2010) J. Magn. Reson. Imag., 32 (3), pp. 663-676. , Sep
Xu, Y., Haacke, E.M., The role of voxel aspect ratio in determining apparent vascular phase behavior in susceptibility weighted imaging (2006) Magn. Reson. Imag., 24 (2), pp. 155-160. , Feb
Kudo, K., Oxygen extraction fraction measurement using quantitative susceptibility mapping: Comparison with positron emission tomography (2015) J. Cerebral Blood Flow Metabolism, 36 (8), p. 6713
Louveau, A., Structural and functional features of central nervous system lymphatic vessels (2015) Nature, 523 (7560), pp. 337-341
Müller, L.O., Toro, E.F., A global multiscale mathematical model for the human circulation with emphasis on the venous system (2014) Int. J. Numer. Methods Biomed. Eng., 30 (7), pp. 681-725. , Jul
Buades, A., Coll, B., Morel, J.-M., A review of image denoising algorithms, with a new one (2005) Multiscale Model. Simul., 4 (2), pp. 490-530
Borrelli, P., Palma, G., Comerci, M., Alfano, B., Unbiased noise estimation and denoising in parallel magnetic resonance imaging (2014) Proc. IEEE Int. Conf. Acoust., Speech Signal Process. (ICASSP), May, pp. 1230-1234
Borrelli, P., Improving signal-to-noise ratio in susceptibility weighted imaging: A novel multicomponent non-local approach (2015) PLoS ONE, 10 (6), p. e0126835
Palma, G., A novel multiparametric approach to 3D quantitative MRI of the brain (2015) PLoS ONE, 10 (8), p. e0134963
Palma, G., 3D non-local means denoising via multi-GPU (2013) Proc. Federated Conf. Comput. Sci. Inf. Syst. (FedCSIS), pp. 495-498. , Sep
Ieee T Med Imaging (ISSN: 0278-0062), 2017; 36(5): 1054-1065.
Export to Esporta in BibTeX Export to Esporta in EndNote
Paper type Tipo di articolo: Journal Article,
Impact factor: 6.131, 5-year impact factor Impact factor a 5 anni: 5.546
Url: https://www.scopus.com/inward/record.uri?eid=2-s2.0-85019170931&doi=10.1109%2fTMI.2016.2645286&partnerID=40&md5=41dc962afe1356f702791a673e9ac74b
Keywords Parole chiave: Brain Veins, Mri, Segmentation, Vesselness, Automation, Image Segmentation, Magnetic Resonance Imaging, Neurodegenerative Diseases, Trees (mathematics), Algorithm Parameters, Automated Segmentation, Manual Segmentation, Neurodegenerative Disorders, Parametric Information, Quantitative And Qualitative Analysis, Traumatic Brain Injuries, Parameter Estimation, Adult, Article, False Positive Result, Female, Human, Human Experiment, Image Analysis, Multiparametric Magnetic Resonance Imaging, Neuroimaging, Normal Human, Quantitative Analysis, Reproducibility, Nuclear Magnetic Resonance Imaging, Cerebral Veins, Reproducibility Of Results,
Affiliations Affiliazioni:
*** IBB - CNR ***
IRCCS SDN, Naples, 80143, Italy
Department of Electronic, Information and Bioengineering, Politecnico di Milano, Milan, 20133, Italy
Department of Advanced Biomedical Sciences, University Federico II, Naples, 80131, Italy
Department of Medical Physics in Radiology, German Cancer Research Center, Heidelberg, 69120, Germany
Institute of Biostructure and Bioimaging, National Research Council, Naples, 80145, Italy
References Riferimenti:
Haacke, E.M., Xu, Y., Cheng, Y.-C.N., Reichenbach, J.R., Susceptibility weighted imaging (SWI) (2004) Magn. Reson. Med., 52 (3), pp. 612-618. , Se
Coutinho, J.M., Gerritsma, J.J., Zuurbier, S.M., Stam, J., Isolated cortical vein thrombosis: Systematic review of case reports and case series (2014) Stroke, 45 (6), pp. 1836-1838
Chen, S., Venous system in acute brain injury: Mechanisms of pathophysiological change and function (2015) Exp. Neurol., 272, pp. 4-10. , Oct
Toro, E.F., Brain venous haemodynamics, neurological diseases and mathematical modelling. A review (2016) Appl. Math. Comput., 272, pp. 542-579. , Jan
Beggs, C.B., Venous hemodynamics in neurological disorders: An analytical review with hydrodynamic analysis (2013) BMC Med., 11 (1), p. 142
Adams, C.W., Abdulla, Y.H., Torres, E.M., Poston, R.N., Periventricular lesions in multiple sclerosis: Their perivenous origin and relationship to granular ependymitis (1987) Neuropathol. Appl. Neurobiol., 13 (2), pp. 141-152
De Simone, R., Ranieri, A., Montella, S., Marchese, M., Bonavita, V., Sinus venous stenosis-associated idiopathic intracranial hypertension without papilledema as a powerful risk factor for progression and refractoriness of headache (2012) Current Pain Headache Rep., 16 (3), pp. 261-269. , Jun
Saposnik, G., Diagnosis and management of cerebral venous thrombosis: A statement for healthcare professionals from the American Heart Association/American stroke association (2011) Stroke, 48 (2), pp. 1158-1192
Tsai, F.Y., Kostanian, V., Rivera, M., Lee, K.-W., Chen, C.C., Nguyen, T.H., Cerebral venous congestion as indication for throm-bolytic treatment (2007) CardioVascular Intervent. Radiol., 30 (4), pp. 675-687. , Jul
Brown, W.R., Thore, C.R., Review: Cerebral microvascular pathology in ageing and neurodegeneration (2011) Neuropathol. Appl. Neurobiol., 37 (1), pp. 56-74. , Feb
Bateman, G., The pathophysiology of idiopathic normal pressure hydro-cephalus: Cerebral ischemia or altered venous hemodynamics? (2008) AJNR Amer. J. Neuroradiol., 29 (1), pp. 198-203
Yan, S., Increased visibility of deep medullary veins in leukoaraio-sis: A 3-T MRI study (2014) Front Aging Neurosci., 6, p. 144. , Sep
Moody, D.M., Brown, W.R., Challa, V.R., Anderson, R.L., Periventricular venous collagenosis: Association with leukoaraiosis (1995) Radiol., 194 (2), pp. 469-476
Kau, T., The 'central vein sign': Is there a place for susceptibility weighted imaging in possible multiple sclerosis? (2013) Eur. Radiol., 23 (7), pp. 1956-1962. , Jul
Gaitán, M.I., De Alwis, M.P., Sati, P., Nair, G., Reich, D.S., Multiple sclerosis shrinks intralesional, and enlarges extralesional, brain parenchymal veins (2013) Neurology, 80 (2), pp. 145-151
Zivadinov, R., Decreased brain venous vasculature visibility on susceptibility-weighted imaging venography in patients with multiple sclerosis is related to chronic cerebrospinal venous insufficiency (2011) BMC Neurol., 11 (1), p. 1
Haacke, E.M., Reichenbach, J.R., (2014) Susceptibility Weighted Imaging MRI: Basic Concepts and Clinical Applications, , Hoboken NJ USA: Wiley
Arrigoni, F., Deep medullary vein involvement in neonates with brain damage: An MR imaging study (2011) AJNR Amer. J. Neuroradiol., 32 (11), pp. 2030-2036
Bériault, S., Sadikot, A.F., Alsubaie, F., Drouin, S., Collins, D.L., Pike, G.B., Neuronavigation using susceptibility-weighted venography: Application to deep brain stimulation and comparison with gadolinium contrast: Technical note (2014) J. Neurosurgery, 121 (1), pp. 131-141
Nowinski, W.L., Volkau, I., Marchenko, Y., Thirunavuukarasuu, A., Ng, T.T., Runge, V.M., A 3D model of human cerebrovasculature derived from 3T magnetic resonance angiography (2009) Neuroinformatics, 7 (1), pp. 23-36
Lesage, D., Angelini, E.D., Bloch, I., Funka-Lea, G., A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes (2009) Med. Image Anal., 13 (6), pp. 819-845. , Aug
Frangi, A.F., Niessen, W.J., Vincken, K.L., Viergever, M.A., Multiscale vessel enhancement filtering (1998) Proc. MICCAI, pp. 130-137
Manniesing, R., Viergever, M.A., Niessen, W.J., Vessel enhancing diffusion: A scale space representation of vessel structures (2006) Med. Image Anal., 10 (6), pp. 815-825
Koopmans, P.J., Manniesing, R., Niessen, W.J., Viergever, M.A., Barth, M., MR venography of the human brain using susceptibility weighted imaging at very high field strength (2008) Magn. Reson. Mater. Phys., Biol. Med., 21 (1), pp. 149-158
Bériault, S., Archambault-Wallenburg, M., Sadikot, A.F., Collins, D.L., Pike, G.B., Automatic Markov random field segmentation of susceptibility-weighted MR venography (2014) Clinical Image-Based Procedures. Translational Research in Medical Imaging, pp. 39-47. , Cham, Switzerland: Springer
Monti, S., A multiparametric and multiscale approach to automated segmentation of brain veins (2015) Proc. 37th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc. (EMBC), Aug., pp. 3041-3044
Bériault, S., Xiao, Y., Collins, D.L., Pike, G.B., Automatic SWI venography segmentation using conditional random fields (2015) IEEE Trans. Med. Imag., 34 (12), pp. 2478-2491. , Dec
Xu, X., Segmentation of cerebral venous vessel in SWI based on multi-adaptive threshold with vessel enhancement and background effects elimination (2012) Proc. 6th Int. Conf. Internet Comput. Sci. Eng. (ICICSE), pp. 107-111. , Apr
Kuijf, H.J., Bouvy, W.H., Zwanenburg, J.J.M., Viergever, M.A., Biessels, G.J., Vincken, K.L., Automated detection of periven-tricular veins on 7 T brain MRI (2015) Proc. SPIE, 9413, p. 94132T
Kuijf, H.J., Quantification of deep medullary veins at 7 T brain MRI (2016) Eur. Radiol., 26 (10), pp. 3412-3418. , Oct
Monti, S., Automated multi-parametric segmentation of brain veins from GRE acquisition (2016) Proc. Int. Soc. Mag. Reson. Med., p. 1906
Smith, S.M., Fast robust automated brain extraction (2002) Human Brain Mapping, 17 (3), pp. 143-155
Cusack, R., Papadakis, N., New robust 3-D phase unwrapping algorithms: Application to magnetic field mapping and undistort-ing echoplanar images (2002) NeuroImage, 16 (3), pp. 754-764. , Jul
Schweser, F., Deistung, A., Lehr, B.W., Reichenbach, J.R., Quantitative imaging of intrinsic magnetic tissue properties using MRI signal phase: An approach to in vivo brain iron metabolism? (2011) NeuroImage, 54 (4), pp. 2789-2807. , Feb
Li, W., A method for estimating and removing streaking arti-facts in quantitative susceptibility mapping (2015) NeuroImage, 108, pp. 111-122. , Mar
Dubuisson, M.-P., Jain, A.K., A modified Hausdorff distance for object matching (1994) Proc. 12th IAPR Int. Conf. Pattern Recognit. (ICPR), 1, pp. 566-568. , Oct
Lee, T.C., Kashyap, R.L., Chu, C.N., Building skeleton models via 3-D medial surface axis thinning algorithms (1994) CVGIP, Graph. Models Image Process., 56 (6), pp. 462-478
Kerschnitzki, M., Architecture of the osteocyte network correlates with bone material quality (2013) J. Bone Mineral Res., 28 (8), pp. 1837-1845
Haacke, E.M., Tang, J., Neelavalli, J., Cheng, Y.C.N., Susceptibility mapping as a means to visualize veins and quantify oxygen saturation (2010) J. Magn. Reson. Imag., 32 (3), pp. 663-676. , Sep
Xu, Y., Haacke, E.M., The role of voxel aspect ratio in determining apparent vascular phase behavior in susceptibility weighted imaging (2006) Magn. Reson. Imag., 24 (2), pp. 155-160. , Feb
Kudo, K., Oxygen extraction fraction measurement using quantitative susceptibility mapping: Comparison with positron emission tomography (2015) J. Cerebral Blood Flow Metabolism, 36 (8), p. 6713
Louveau, A., Structural and functional features of central nervous system lymphatic vessels (2015) Nature, 523 (7560), pp. 337-341
Müller, L.O., Toro, E.F., A global multiscale mathematical model for the human circulation with emphasis on the venous system (2014) Int. J. Numer. Methods Biomed. Eng., 30 (7), pp. 681-725. , Jul
Buades, A., Coll, B., Morel, J.-M., A review of image denoising algorithms, with a new one (2005) Multiscale Model. Simul., 4 (2), pp. 490-530
Borrelli, P., Palma, G., Comerci, M., Alfano, B., Unbiased noise estimation and denoising in parallel magnetic resonance imaging (2014) Proc. IEEE Int. Conf. Acoust., Speech Signal Process. (ICASSP), May, pp. 1230-1234
Borrelli, P., Improving signal-to-noise ratio in susceptibility weighted imaging: A novel multicomponent non-local approach (2015) PLoS ONE, 10 (6), p. e0126835
Palma, G., A novel multiparametric approach to 3D quantitative MRI of the brain (2015) PLoS ONE, 10 (8), p. e0134963
Palma, G., 3D non-local means denoising via multi-GPU (2013) Proc. Federated Conf. Comput. Sci. Inf. Syst. (FedCSIS), pp. 495-498. , Sep
MAVEN: An Algorithm for Multi-Parametric Automated Segmentation of Brain Veins from Gradient Echo Acquisitions
Cerebral vein analysis provides a chance to study, from an unusual viewpoint, an entire class of brain diseases, including neurodegenerative disorders and traumatic brain injuries. Manual segmentation approaches can be used to assess vascular anatomy, but they are observer-dependent and time-consuming; therefore, automated approaches are desirable, as they also improve reproducibility. In this paper, a new, fully automated algorithm, based on structural, morphological, and relaxometric information, is proposed to segment the entire cerebral venous system from MR images. The algorithm for multi-parametric automated segmentation of brain VEiNs (MAVEN) is based on a combined investigation of multi-parametric information that allows for rejection of false positives and detection of thin vessels. The method is tested on gradient echo brain data sets acquired at 1.5, 3, and 7 T. It is compared to previous methods against manual segmentation, and its inter-scan reproducibility is assessed. The achieved accuracy and reproducibility are good, meaning that MAVEN outperforms previous methods on both quantitative and qualitative analyses. It is usable at all the field strengths explored, showing comparable accuracy scores, with no need for algorithm parameter adjustments, and thus, it is a promising candidate for the characterization of the venous tree topology. © 2017 IEEE.
Cerebral vein analysis provides a chance to study, from an unusual viewpoint, an entire class of brain diseases, including neurodegenerative disorders and traumatic brain injuries. Manual segmentation approaches can be used to assess vascular anatomy, but they are observer-dependent and time-consuming; therefore, automated approaches are desirable, as they also improve reproducibility. In this paper, a new, fully automated algorithm, based on structural, morphological, and relaxometric information, is proposed to segment the entire cerebral venous system from MR images. The algorithm for multi-parametric automated segmentation of brain VEiNs (MAVEN) is based on a combined investigation of multi-parametric information that allows for rejection of false positives and detection of thin vessels. The method is tested on gradient echo brain data sets acquired at 1.5, 3, and 7 T. It is compared to previous methods against manual segmentation, and its inter-scan reproducibility is assessed. The achieved accuracy and reproducibility are good, meaning that MAVEN outperforms previous methods on both quantitative and qualitative analyses. It is usable at all the field strengths explored, showing comparable accuracy scores, with no need for algorithm parameter adjustments, and thus, it is a promising candidate for the characterization of the venous tree topology. © 2017 IEEE.
MAVEN: An Algorithm for Multi-Parametric Automated Segmentation of Brain Veins from Gradient Echo Acquisitions
MAVEN: An Algorithm for Multi-Parametric Automated Segmentation of Brain Veins from Gradient Echo Acquisitions
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* Evaluation of supervised methods for the classification of major tissues and subcortical structures in multispectral brain magnetic resonance images (392 visite) (PDF 219 visite)
Comput Med Imag Grap (ISSN: 0895-6111), 2014 Jul; 38(5): 337-347.
Impact Factor: 1.218
Dettagli Esporta in BibTeX Esporta in EndNote
Comerci M, Elefante A, Strianese D, Senese R, Bonavolonta P, Alfano B, Bonavolonta B, Brunetti A
* Semiautomatic regional segmentation to measure orbital fat volumes in thyroid-associated ophthalmopathy. A validation study (422 visite) (PDF 246 visite)
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Impact Factor: 2.16
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Zanoli LM, Spoto G
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Impact Factor: 0
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Alfano B, Comerci M, Larobina M, Prinster A, Hornak JP, Selvan SE, Amato U, Quarantelli M, Tedeschi G, Brunetti A, Salvatore M
* An MRI digital brain phantom for validation of segmentation methods (459 visite) (PDF 652 visite)
Med Image Anal (ISSN: 1361-8415, 1361-8423, 1361-8415linking), 2011 Jun; 15(3): 329-339.
Impact Factor: 4.424
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Scognamiglio PL, Doti N, Grieco P, Pedone C, Ruvo M, Marasco D
* Discovery Of Small Peptide Antagonists Of Ped/Pea15-D4alpha Interaction From Simplified Combinatorial Libraries (439 visite)
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Impact Factor: 2.282
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Impact Factor: 1.79
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Marasco D, Perretta G, Sabatella M, Ruvo M
* Past and Future Perspectives of Synthetic Peptide Libraries (498 visite)
Curr Protein Pept Sci (ISSN: 1389-2037), 2008 Oct; 9(5): 447-467.
Impact Factor: 3.011
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Tedeschi G, Dinacci D, Lavorgna L, Prinster A, Savettieri G, Quattrone A, Livrea P, Messina C, Reggio A, Servillo G, Bresciamorra V, Orefice G, Paciello M, Brunetti A, Paolillo A, Coniglio G, Bonavita S, Di Costanzo A, Bellacosa A, Valentino P, Quarantelli M, Patti F, Salemi G, Cammarata E, Simone I, Salvatore M, Bonavita V, Alfano B
* Correlation between fatigue and brain atrophy and lesion load in multiple sclerosis patients independent of disability (472 visite) (PDF 226 visite)
J Neurol Sci (ISSN: 0022-510x), 2007 Dec 15; 263(1-2): 15-19.
Impact Factor: 2.315
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Alfano B, Comerci M, De Pietro G, Esposito A
* An ontology-based technique for validation of MRI brain segmentation methods (354 visite) (PDF 234 visite)
Lecture Notes In Computer Science (ISSN: 0302-9743, 0302-974335404636319783540463634, 0302-974335402975459783540297543), 2007; 4805LNCS(PART1): 566-575.
Impact Factor: 0.302
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Quarantelli M, Lanzillo R, Del Vecchio W, Mollica C, Prinster A, Iadicicco L, Iodice V, Santoro L, Salvatore M
* Modifications of brain tissue volumes in facioscapulohumeral dystrophy (466 visite)
Neuroimage (ISSN: 1053-8119, 1053-8119linking), 2006 Sep; 32(3): 1237-1242.
Impact Factor: 5.559
Dettagli Esporta in BibTeX Esporta in EndNote
Berkouk K, Quarantelli M, Prinster A, Landeau B, Alfano B, Baron JC
* Mapping The Relative Contribution Of Gray Matter Activity Versus Volume In Brain Pet. A New Approach (346 visite) (PDF 216 visite)
J Neuroimaging (ISSN: 1051-2284), 2006 Jul; 16(3): 224-235.
Impact Factor: 1.298
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Tedeschi G, Dinacci D, Lavorgna L, Bonavita V, Livrea P, Quattrone A, Messina C, Savettieri G, Paciello M, Reggio A, Brunetti A, Russo P, Alfano B
* Automated brain MR segmentation in a large MS population (360 visite)
Neurology (ISSN: 0028-3878, 1526-632x, 1526-632xelectronic), 2004 Apr 13; 62(7): N/D-N/D.
Impact Factor: 5.973
Dettagli Esporta in BibTeX Esporta in EndNote
Amato U, Larobina M, Antoniadis A, Alfano B
* Segmentation of magnetic resonance brain images through discriminant analysis (518 visite) (PDF 230 visite)
J Neurosci Methods (ISSN: 0165-0270, 0165-0270linking, 1872-678xelectronic), 2003 Dec 30; 131(1-2): 65-74.
Impact Factor: 1.777
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Quarantelli M, Ciarmiello A, Morra VB, Orefice G, Larobina M, Lanzillo R, Schiavone V, Salvatore E, Alfano B, Brunetti A
* Brain tissue volume changes in relapsing-remitting multiple sclerosis: Correlation with lesion load (403 visite) (PDF 226 visite)
Neuroimage (ISSN: 1053-8119, 1053-8119linking), 2003 Feb; 18(2): 360-366.
Impact Factor: 6.192
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Larobina M, Quarantelli M, Tedeschi E, Ciarmiello A, Covelli EM, Salvatore M
Automated segmentation and measurement of global white matter lesion volume in patients with multiple sclerosis (418 visite) (PDF 609 visite)
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Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Postiglione A, Tedeschi E, Ciarmiello A, Quarantelli M, Covelli EM, Milan G, Larobina M, Soricelli A, Sodano A, Alfano B
Measurement of global brain atrophy in Alzheimer's disease with unsupervised segmentation of spin-echo MRI studies (520 visite) (PDF 261 visite)
J Magn Reson Imaging (ISSN: 1053-1807, 1522-2586electronic), 2000 Mar; 11(3): 260-266.
Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Postiglione A, Tedeschi E, Ciarmiello A, Quarantelli M, Covelli E, Milan G, Larobina M, Soricelli A, Sodano A, Alfano B
Measurement of global drain atrophy in Alzheimer's disease with unsupervised segmentation of spin-echo MRI studies (408 visite)
J Magn Reson Imaging (ISSN: 1053-1807, 1522-2586electronic), 2000 Mar; 11(3): N/D-N/D.
Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Larobina M, Quarantelli M, Tedeschi E, Brunetti A, Alfano B, Salvatore M
Validation of an automated regional brain segmentation method using a stereotactic Talairach approach (422 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1999; 1191: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Quarantelli M, Brunetti A, Larobina M, Covelli EM, Tedeschi E, Salvatore M
Reproducibility of intracranial volume measurement by unsupervised multispectral brain segmentation (481 visite) (PDF 587 visite)
Magn Reson Med (ISSN: 0740-3194, 1522-2594electronic), 1998 Mar; 39(3): 497-499.
Impact Factor: 2.962
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Covelli EM, Quarantelli M, Panico M, Ciarmiello A, Salvatore M
Unsupervised, automated segmentation of the normal brain using a multispectral relaxometric magnetic resonance approach (476 visite) (PDF 665 visite)
Magn Reson Med (ISSN: 0740-3194, 1522-2594electronic, 0740-3194linking), 1997 Jan; 37(1): 84-93.
Impact Factor: 3.012
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Quarantelli M, Larobina M, Covelli EM, Tedeschi E, Ciarmiello A, Salvatore M
Fully-automated multispectral MR brain segmentation for detection and volumetric measurement of white matter lesions (338 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1997; 1134: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Covelli E, Tedeschi E, Quarantelli M, Soricelli A, Salvatore M, Alfano B
Unsupervised multifeature MR segmentation for assessment of intracranial liquoral spaces: Comparison with conventional linear measures (334 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1996; 1124: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
ALFANO B, ARPAIA M, BRUNETTI A, COVELLI E, CASTELLI L, CARACO C, SORICELLI A, TEDESCHI E, SALVATORE M
Automatic segmentation and evaluation of the volume of gray matter, white matter and cerebrospinal fluid by MRI (301 visite)
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Impact Factor: 0
Dettagli Esporta in BibTeX Esporta in EndNote
Salvati AM, d'Onofrio G, Berti P, Cappabianca MP, Marsili G, De Philippis C, Cossa L, Quarantelli M, Zini G, Mango G
An assessment of the operating characteristics of Coulter Counter model S-Plus STKR (538 visite)
Haematologica (ISSN: 0390-6078, 0006-4971, 0006-6497), 1991 Mar; 76(2): 94-103.
Impact Factor: 2.56
Dettagli Esporta in BibTeX Esporta in EndNote
34 Records (23 escludendo Abstract e Conferenze).
Impact factor totale: 69.366 (57.475 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 85.566 (67.164 escludendo Abstract e Conferenze).
Vai a fine pagina Versione per copia e incolla facile Esporta tutto in BibTeX Esporta tutto in EndNote
Clemente S, Oliviero C, Palma G, D'Avino V, Liuzzi R, Conson M, Pacelli R, Cella L
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Impact Factor: 2.862
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* Jugular Venous Flow Quantification Using Doppler Sonography (236 visite)
Ultrasound Med Biol (ISSN: 0301-5629linking, 1879-291xelectronic), 2018 Aug; 44(8): 1762-1769.
Impact Factor: 2.494
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* Assessment of an automated vein segmentation algorithm for MRI brain acquisitions at different field strengths (354 visite) (PDF 178 visite)
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* Multi-parametric algorithm for the automated segmentation of brain vein (330 visite) (PDF 181 visite)
6th Annual Meeting Of The International Society For Neurovascular Disease, 2016 Apr; N/D: N/D-N/D.
Impact Factor: 0
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Mainenti PP, Pizzuti LM, Segreto S, Comerci M, Fronzo SD, Romano F, Crisci V, Smaldone M, Laccetti E, Storto G, Alfano B, Maurea S, Salvatore M, Pace L
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Impact Factor: 2.462
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Monti S, Palma G, Borrelli P, Tedeschi E, Cocozza S, Salvatore M, Mancini M
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Impact Factor: 0
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* MULTIPARAMETRIC AUTOMATED SEGMENTATION OF BRAIN VEINS (385 visite)
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Impact Factor: 0
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* Evaluation of supervised methods for the classification of major tissues and subcortical structures in multispectral brain magnetic resonance images (392 visite) (PDF 219 visite)
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Impact Factor: 1.218
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Impact Factor: 2.16
Dettagli Esporta in BibTeX Esporta in EndNote
Zanoli LM, Spoto G
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Impact Factor: 0
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Alfano B, Comerci M, Larobina M, Prinster A, Hornak JP, Selvan SE, Amato U, Quarantelli M, Tedeschi G, Brunetti A, Salvatore M
* An MRI digital brain phantom for validation of segmentation methods (459 visite) (PDF 652 visite)
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Impact Factor: 4.424
Dettagli Esporta in BibTeX Esporta in EndNote
Scognamiglio PL, Doti N, Grieco P, Pedone C, Ruvo M, Marasco D
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Impact Factor: 2.282
Dettagli Esporta in BibTeX Esporta in EndNote
Ceccarelli M, Speranza A, Grimaldi D, Lamonaca F
* A Computer Vision Approach to Micro-Nucleus automatic detection and surface measurements (377 visite)
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Impact Factor: 1.79
Dettagli Esporta in BibTeX Esporta in EndNote
Marasco D, Perretta G, Sabatella M, Ruvo M
* Past and Future Perspectives of Synthetic Peptide Libraries (498 visite)
Curr Protein Pept Sci (ISSN: 1389-2037), 2008 Oct; 9(5): 447-467.
Impact Factor: 3.011
Dettagli Esporta in BibTeX Esporta in EndNote
Tedeschi G, Dinacci D, Lavorgna L, Prinster A, Savettieri G, Quattrone A, Livrea P, Messina C, Reggio A, Servillo G, Bresciamorra V, Orefice G, Paciello M, Brunetti A, Paolillo A, Coniglio G, Bonavita S, Di Costanzo A, Bellacosa A, Valentino P, Quarantelli M, Patti F, Salemi G, Cammarata E, Simone I, Salvatore M, Bonavita V, Alfano B
* Correlation between fatigue and brain atrophy and lesion load in multiple sclerosis patients independent of disability (472 visite) (PDF 226 visite)
J Neurol Sci (ISSN: 0022-510x), 2007 Dec 15; 263(1-2): 15-19.
Impact Factor: 2.315
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Comerci M, De Pietro G, Esposito A
* An ontology-based technique for validation of MRI brain segmentation methods (354 visite) (PDF 234 visite)
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Impact Factor: 0.302
Dettagli Esporta in BibTeX Esporta in EndNote
Quarantelli M, Lanzillo R, Del Vecchio W, Mollica C, Prinster A, Iadicicco L, Iodice V, Santoro L, Salvatore M
* Modifications of brain tissue volumes in facioscapulohumeral dystrophy (466 visite)
Neuroimage (ISSN: 1053-8119, 1053-8119linking), 2006 Sep; 32(3): 1237-1242.
Impact Factor: 5.559
Dettagli Esporta in BibTeX Esporta in EndNote
Berkouk K, Quarantelli M, Prinster A, Landeau B, Alfano B, Baron JC
* Mapping The Relative Contribution Of Gray Matter Activity Versus Volume In Brain Pet. A New Approach (346 visite) (PDF 216 visite)
J Neuroimaging (ISSN: 1051-2284), 2006 Jul; 16(3): 224-235.
Impact Factor: 1.298
Dettagli Esporta in BibTeX Esporta in EndNote
Tedeschi G, Dinacci D, Lavorgna L, Bonavita V, Livrea P, Quattrone A, Messina C, Savettieri G, Paciello M, Reggio A, Brunetti A, Russo P, Alfano B
* Automated brain MR segmentation in a large MS population (360 visite)
Neurology (ISSN: 0028-3878, 1526-632x, 1526-632xelectronic), 2004 Apr 13; 62(7): N/D-N/D.
Impact Factor: 5.973
Dettagli Esporta in BibTeX Esporta in EndNote
Amato U, Larobina M, Antoniadis A, Alfano B
* Segmentation of magnetic resonance brain images through discriminant analysis (518 visite) (PDF 230 visite)
J Neurosci Methods (ISSN: 0165-0270, 0165-0270linking, 1872-678xelectronic), 2003 Dec 30; 131(1-2): 65-74.
Impact Factor: 1.777
Dettagli Esporta in BibTeX Esporta in EndNote
Quarantelli M, Ciarmiello A, Morra VB, Orefice G, Larobina M, Lanzillo R, Schiavone V, Salvatore E, Alfano B, Brunetti A
* Brain tissue volume changes in relapsing-remitting multiple sclerosis: Correlation with lesion load (403 visite) (PDF 226 visite)
Neuroimage (ISSN: 1053-8119, 1053-8119linking), 2003 Feb; 18(2): 360-366.
Impact Factor: 6.192
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Larobina M, Quarantelli M, Tedeschi E, Ciarmiello A, Covelli EM, Salvatore M
Automated segmentation and measurement of global white matter lesion volume in patients with multiple sclerosis (418 visite) (PDF 609 visite)
J Magn Reson Imaging (ISSN: 1053-1807, 1522-2586electronic, 1053-1807linking), 2000 Dec; 12(6): 799-807.
Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Postiglione A, Tedeschi E, Ciarmiello A, Quarantelli M, Covelli EM, Milan G, Larobina M, Soricelli A, Sodano A, Alfano B
Measurement of global brain atrophy in Alzheimer's disease with unsupervised segmentation of spin-echo MRI studies (520 visite) (PDF 261 visite)
J Magn Reson Imaging (ISSN: 1053-1807, 1522-2586electronic), 2000 Mar; 11(3): 260-266.
Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Postiglione A, Tedeschi E, Ciarmiello A, Quarantelli M, Covelli E, Milan G, Larobina M, Soricelli A, Sodano A, Alfano B
Measurement of global drain atrophy in Alzheimer's disease with unsupervised segmentation of spin-echo MRI studies (408 visite)
J Magn Reson Imaging (ISSN: 1053-1807, 1522-2586electronic), 2000 Mar; 11(3): N/D-N/D.
Impact Factor: 1.302
Dettagli Esporta in BibTeX Esporta in EndNote
Larobina M, Quarantelli M, Tedeschi E, Brunetti A, Alfano B, Salvatore M
Validation of an automated regional brain segmentation method using a stereotactic Talairach approach (422 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1999; 1191: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Quarantelli M, Brunetti A, Larobina M, Covelli EM, Tedeschi E, Salvatore M
Reproducibility of intracranial volume measurement by unsupervised multispectral brain segmentation (481 visite) (PDF 587 visite)
Magn Reson Med (ISSN: 0740-3194, 1522-2594electronic), 1998 Mar; 39(3): 497-499.
Impact Factor: 2.962
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Covelli EM, Quarantelli M, Panico M, Ciarmiello A, Salvatore M
Unsupervised, automated segmentation of the normal brain using a multispectral relaxometric magnetic resonance approach (476 visite) (PDF 665 visite)
Magn Reson Med (ISSN: 0740-3194, 1522-2594electronic, 0740-3194linking), 1997 Jan; 37(1): 84-93.
Impact Factor: 3.012
Dettagli Esporta in BibTeX Esporta in EndNote
Alfano B, Brunetti A, Quarantelli M, Larobina M, Covelli EM, Tedeschi E, Ciarmiello A, Salvatore M
Fully-automated multispectral MR brain segmentation for detection and volumetric measurement of white matter lesions (338 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1997; 1134: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
Brunetti A, Covelli E, Tedeschi E, Quarantelli M, Soricelli A, Salvatore M, Alfano B
Unsupervised multifeature MR segmentation for assessment of intracranial liquoral spaces: Comparison with conventional linear measures (334 visite)
Surgery International Congress Series Car 97 (ISSN: 0531-5131), 1996; 1124: N/D-N/D.
Impact Factor: 1.438
Dettagli Esporta in BibTeX Esporta in EndNote
ALFANO B, ARPAIA M, BRUNETTI A, COVELLI E, CASTELLI L, CARACO C, SORICELLI A, TEDESCHI E, SALVATORE M
Automatic segmentation and evaluation of the volume of gray matter, white matter and cerebrospinal fluid by MRI (301 visite)
Neuroradiology 1994, 1994; N/D: N/D-N/D.
Impact Factor: 0
Dettagli Esporta in BibTeX Esporta in EndNote
Salvati AM, d'Onofrio G, Berti P, Cappabianca MP, Marsili G, De Philippis C, Cossa L, Quarantelli M, Zini G, Mango G
An assessment of the operating characteristics of Coulter Counter model S-Plus STKR (538 visite)
Haematologica (ISSN: 0390-6078, 0006-4971, 0006-6497), 1991 Mar; 76(2): 94-103.
Impact Factor: 2.56
Dettagli Esporta in BibTeX Esporta in EndNote
34 Records (23 escludendo Abstract e Conferenze).
Impact factor totale: 69.366 (57.475 escludendo Abstract e Conferenze).
Impact factor a 5 anni totale: 85.566 (67.164 escludendo Abstract e Conferenze).
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