A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish (850 views)
Biochem J (ISSN: 1470-8728electronic, 0264-6021linking, 0264-6021print), 2011 Jan 15; 433(2): 345-355.
Export to BibTeX Export to EndNote
Paper type: Journal Article, Research Support, Non-U. S. Gov'T,
Impact factor: 4.897, 5-year impact factor: 4.693
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-78651266853&partnerID=40&md5=30a61a9b637299df0873584fb2dc55dc
Keywords: Angiogenin, Bactericidal Activity, Rnase, Vertebrate, Zebrafish (zf) (danio Rerio), Enzyme, Ribonuclease, Unclassified Drug, Article, Biological Activity, Controlled Study, Drug Structure, Human, Nonhuman, Priority Journal, Thermodynamics, Zebra Fish, Amino Acid Sequence, Animals, Cells, Cultured, Gene Expression Regulation, Developmental, Enzymologic, Models, Molecular, Molecular Sequence Data, Protein Structure, Tertiary, Pancreatic, Sequence Alignment, Pancreatic Chemistry, Genetics, Metabolism, Ribonucleases Chemistry, Embryology, Genetics Metabolism, Pancreatic Chemistry Genetics Metabolism, Ribonucleases Chemistry Genetics Metabolism, Zebrafish Embryology Genetics Metabolism,
Affiliations:
*** IBB - CNR ***
Dipartimento di Biologia Strutturale e Funzionale, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy
Dipartimento di Chimica, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy
Istituto di Biostrutture e Bioimmagini, Consiglio Nazionale Delle Ricerche (CNR), Via Mezzocannone 16, I-80134 Naples, Italy
References:
Pizzo, E., D'Alessio, G., The success of the RNase scaffold in the advance of biosciences and in evolution (2007) Gene, 406, pp. 8-1
Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., FitzHugh, W., Initial sequencing and analysis of the human genome (2001) Nature, 409, pp. 860-921
Cho, S., Zhang, J., Zebrafish ribonucleases are bactericidal: Implications for the origin of the vertebrate RNase A superfamily (2007) Mol. Biol. Evol., 24, pp. 1259-1268
Kazakou, K., Holloway, D.E., Prior, S.H., Subramanian, V., Acharya, K.R., Ribonuclease A homologues of the zebrafish: Polymorphism, crystal structures of two representatives and their evolutionary implications (2008) J. Mol. Biol., 380, pp. 206-222
Pizzo, E., Buonanno, P., Di Maro, A., Ponticelli, S., De Falco, S., Quarto, N., Cubellis, M.V., D'Alessio, G., Ribonucleases and angiogenins from fish (2006) J. Biol. Chem., 281, pp. 27454-27460
Pizzo, E., Varcamonti, M., Di Maro, A., Zanfardino, A., Giancola, C., D'Alessio, G., Ribonucleases with angiogenic and bactericidal activities from the Atlantic salmon (2008) FEBS J., 275, pp. 1283-1295
Kishikawa, H., Wu, D., Hu, G.F., Targeting angiogenin in therapy of amyotropic lateral sclerosis (2008) Expert Opin. Ther. Targets, 12, pp. 1229-1242
Fu, H., Feng, J., Liu, Q., Sun, F., Tie, Y., Zhu, J., Xing, R., Zheng, X., Stress induces tRNA cleavage by angiogenin in mammalian cells (2009) FEBS Lett., 583, pp. 437-442
Yamasaki, S., Ivanov, P., Hu, G.F., Anderson, P., Angiogenin cleaves tRNA and promotes stress-induced translational repression (2009) J. Cell Biol., 185, pp. 35-42
Quarto, N., Pizzo, E., D'Alessio, G., Temporal and spatial expression of RNases from zebrafish ( Danio rerio) (2008) Gene, 427, pp. 32-41
Covassin, L.D., Siekmann, A.F., Kacergis, M.C., Laver, E., Moore, J.C., Villefranc, J.A., Weinstein, B.M., Lawson, N.D., A genetic screen for vascular mutants in zebrafish reveals dynamic roles for Vegf/Plcg1 signaling during artery development (2009) Dev. Biol., 329, pp. 212-226
Lawson, N.D., Weinstein, B.M., Arteries and veins: Making a difference with zebrafish (2002) Nat. Rev. Genet., 3, pp. 674-682
Ny, A., Autiero, M., Carmeliet, P., Zebrafish and Xenopus tadpoles: Small animal models to study angiogenesis and lymphangiogenesis (2006) Exp. Cell Res., 312, pp. 684-693
Monti, D.M., Yu, W., Pizzo, E., Shima, K., Hu, M.G., Di Malta, C., Piccoli, R., Hu, G.F., Characterization of the angiogenic activity of zebrafish ribonucleases (2009) FEBS J., 276, pp. 4077-4090
Rosenberg, H.F., Recombinant human eosinophil cationic protein ribonuclease activity is not essential for cytotoxicity (1995) J. Biol. Chem., 270, pp. 7876-7881
Blank, A., Sugiyama, R.H., Dekker, C.A., Activity staining of nucleolytic enzymes after sodium dodecyl sulfate-polyacrylamide gel electrophoresis: Use of aqueous isopropanol to remove detergent from gels (1982) Anal. Biochem., 120, pp. 267-275
Kelemen, B.R., Klink, T.A., Behlke, M.A., Eubanks, S.R., Leland, P.A., Raines, R.T., Hypersensitive substrate for ribonucleases (1999) Nucleic Acids Res., 27, pp. 3696-3701
Venyaminov, S.Y., Yang, J.T., Determination of protein secondary structure (1996) Circular Dichroism and the Conformational Analysis of Biomolecules, pp. 69-107. , Fasman, G. D., ed., Plenum Press, New York
Barone, G., Del Vecchio, P., Fessas, D., Giancola, C., Graziano, G., THESEUS: A new software package for the handling and analysis of thermal denaturation data for biological macromolecules (1993) J. Thermal Anal., 39, pp. 2779-2790
Otwinowsky, Z., Minor, W., Processing of X-ray diffraction data collected in oscillation mode (1997) Methods in Enzymology, pp. 307-326. , Carter, Jr, C. W. and Sweet, R. M., eds, Academic Press, San Diego
McCoy, A.J., Grosse-Kunstleve, R.W., Storoni, L.C., Read, R.J., Likelihood-enhanced fast translation functions (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 458-464
Acharya, K.R., Shapiro, R., Riordan, J.F., Vallee, B.L., Crystal structure of bovine angiogenin at 1.5-Å resolution (1995) Proc. Natl. Acad. Sci U.S.A., 92, pp. 2949-2953
Brunger, A.T., Adams, P.D., Clore, G.M., DeLano, W.L., Gros, P., Grosse-Kunstleve, R.W., Jiang, J.S., Pannu, N.S., Crystallography & NMR system: A new software suite for macromolecular structure determination (1998) Acta Crystallogr. D Biol. Crystallogr., 54, pp. 905-921
Jones, T.A., Zou, J.Y., Cowan, S.W., Kjedgaard, M., Improved methods for binding protein models in electron density maps and the location of errors in these models (1991) Acta Crystallogr. D Biol. Crystallogr., 56, pp. 714-721
Laskowski, R.A., MacArthur, M.W., Moss, M.D., Thornton, J.M., PROCHECK: A program to check the stereochemical quality of protein structure (1993) J. Appl. Crystallogr., 26, pp. 283-291
Hooft, R.W., Vriend, G., Sander, C., Abola, E.E., Errors in protein structures (1996) Nature, 381, p. 272
Schwede, T., Kopp, J., Guex, N., Peitsch, M.C., SWISS-MODEL: An automated protein homology-modeling server (2003) Nucleic Acids Res., 31, pp. 3381-3385
Merlino, A., Graziano, G., Mazzarella, L., Structural and dynamic effects of α-helix deletion in Sso7d: Implications for protein thermal stability (2004) Proteins, 57, pp. 692-701
Porcelli, M., Moretti, M.A., Concilio, L., Forte, S., Merlino, A., Graziano, G., Cacciapuoti, G., S-adenosylhomocysteine hydrolase from the archaeon Pyrococcus furiosus: Biochemical characterization and analysis of protein structure by comparative molecular modeling (2005) Proteins, 58, pp. 815-825
Sippl, M.J., Recognition of errors in three-dimensional structures of proteins (1993) Proteins, 17, pp. 355-362
Sippl, M.J., Knowledge-based potentials for proteins (1995) Curr. Opin. Struct. Biol., 5, pp. 229-235
Berisio, R., Lamzin, V.S., Sica, F., Wilson, K.S., Zagari, A., Mazzarella, L., Protein titration in the crystal state (1999) J. Mol. Biol., 292, pp. 845-854
Holloway, D.E., Chavali, G.B., Hares, M.C., Subramanian, V., Acharya, K.R., Structure of murine angiogenin: Features of the substrate- and cell-binding regions and prospects for inhibitor-binding studies (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 1568-1578
Leonidas, D.D., Chavali, G.B., Jardine, A.M., Li, S., Shapiro, R., Acharya, K.R., Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography (2001) Protein Sci., 10, pp. 1669-1676
Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L., Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2′,5′)guanosine (2000) Protein Sci., 9, pp. 1217-1225
Mazzarella, L., Capasso, S., Demasi, D., Di Lorenzo, G., Mattia, C.A., Zagari, A., Bovine seminal ribonuclease. Structure at 1.9 Å resolution (1993) Acta Crystallogr. D Biol. Crystallogr., 49, pp. 389-402
Merlino, A., Mazzarella, L., Carannante, A., Di Fiore, A., Di Donato, A., Notomista, E., Sica, F., The importance of dynamic effects on the enzyme activity: X-ray structure and molecular dynamics of onconase mutants (2005) J. Biol. Chem., 280, pp. 17953-17960
Merlino, A., Vitagliano, L., Sica, F., Zagari, A., Mazzarella, L., Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer (2004) Biopolymers, 73, pp. 689-695
Barone, G., Catanzano, F., Del Vecchio, P., Giancola, C., Graziano, G., Thermodynamics of protein stability: A family of ribonucleases (1997) Pure Appl. Chem., 69, pp. 2307-2313
Crabtree, B., Thiyagarajan, N., Prior, S.H., Wilson, P., Iyer, S., Ferns, T., Shapiro, R., Acharya, K.R., Characterization of human angiogenin variants implicated in amyotrophic lateral sclerosis (2007) Biochemistry, 46, pp. 11810-11818
Leland, P.A., Staniszewski, K.E., Park, C., Kelemen, B.R., Raines, R.T., The ribonucleolytic activity of angiogenin (2002) Biochemistry, 41, pp. 1343-1350
Zanfardino, A., Pizzo, E., Di Maro, A., Varcamonti, M., D'Alessio, G., The bactericidal action on Escherichia coliof ZF-RNase-3 is triggered by the suicidal action of the bacterium OmpT protease (2010) FEBS J., 277, pp. 1921-1928
Moussaoui, M., Guasch, A., Boix, E., Cuchillo, C., Nogues, M., The role of non-catalytic binding subsites in the endonuclease activity of bovine pancreatic ribonuclease A (1996) J. Biol. Chem., 271, pp. 4687-4692
Schultz, L.W., Quirk, D.J., Raines, R.T., His... Asp catalytic dyad of ribonuclease A: Structure and function of the wild-type, D121N, and D121A enzymes (1998) Biochemistry, 37, pp. 8886-8898
Huang, Y.C., Lin, Y.M., Chang, T.W., Wu, S.J., Lee, Y.S., Chang, M.D., Chen, C., Liao, Y.D., The flexible and clustered lysine residues of human ribonuclease 7 are critical for membrane permeability and antimicrobial activity (2007) J. Biol. Chem., 282, pp. 4626-4633
Nitto, T., Dyer, K.D., Czapiga, M., Rosenberg, H.F., Evolution and function of leukocyte RNase a ribonucleases of the avian species, Gallus gallus (2006) J. Biol. Chem., 281, pp. 25622-25634
Piatigorsky, J., Wistow, G., The recruitment of crystallins: New functions precede gene duplication (1991) Science, 252, pp. 1078-1079
Lander, E. S., Linton, L. M., Birren, B., Nusbaum, C., Zody, M. C., Baldwin, J., Devon, K., FitzHugh, W., Initial sequencing and analysis of the human genome (2001) Nature, 409, pp. 860-921
Covassin, L. D., Siekmann, A. F., Kacergis, M. C., Laver, E., Moore, J. C., Villefranc, J. A., Weinstein, B. M., Lawson, N. D., A genetic screen for vascular mutants in zebrafish reveals dynamic roles for Vegf/Plcg1 signaling during artery development (2009) Dev. Biol., 329, pp. 212-226
Lawson, N. D., Weinstein, B. M., Arteries and veins: Making a difference with zebrafish (2002) Nat. Rev. Genet., 3, pp. 674-682
Monti, D. M., Yu, W., Pizzo, E., Shima, K., Hu, M. G., Di Malta, C., Piccoli, R., Hu, G. F., Characterization of the angiogenic activity of zebrafish ribonucleases (2009) FEBS J., 276, pp. 4077-4090
Rosenberg, H. F., Recombinant human eosinophil cationic protein ribonuclease activity is not essential for cytotoxicity (1995) J. Biol. Chem., 270, pp. 7876-7881
Kelemen, B. R., Klink, T. A., Behlke, M. A., Eubanks, S. R., Leland, P. A., Raines, R. T., Hypersensitive substrate for ribonucleases (1999) Nucleic Acids Res., 27, pp. 3696-3701
Venyaminov, S. Y., Yang, J. T., Determination of protein secondary structure (1996) Circular Dichroism and the Conformational Analysis of Biomolecules, pp. 69-107. , Fasman, G. D., ed., Plenum Press, New York
McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C., Read, R. J., Likelihood-enhanced fast translation functions (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 458-464
Acharya, K. R., Shapiro, R., Riordan, J. F., Vallee, B. L., Crystal structure of bovine angiogenin at 1. 5- resolution (1995) Proc. Natl. Acad. Sci U. S. A., 92, pp. 2949-2953
Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Pannu, N. S., Crystallography & NMR system: A new software suite for macromolecular structure determination (1998) Acta Crystallogr. D Biol. Crystallogr., 54, pp. 905-921
Jones, T. A., Zou, J. Y., Cowan, S. W., Kjedgaard, M., Improved methods for binding protein models in electron density maps and the location of errors in these models (1991) Acta Crystallogr. D Biol. Crystallogr., 56, pp. 714-721
Laskowski, R. A., MacArthur, M. W., Moss, M. D., Thornton, J. M., PROCHECK: A program to check the stereochemical quality of protein structure (1993) J. Appl. Crystallogr., 26, pp. 283-291
Hooft, R. W., Vriend, G., Sander, C., Abola, E. E., Errors in protein structures (1996) Nature, 381, p. 272
Sippl, M. J., Recognition of errors in three-dimensional structures of proteins (1993) Proteins, 17, pp. 355-362
Sippl, M. J., Knowledge-based potentials for proteins (1995) Curr. Opin. Struct. Biol., 5, pp. 229-235
Holloway, D. E., Chavali, G. B., Hares, M. C., Subramanian, V., Acharya, K. R., Structure of murine angiogenin: Features of the substrate- and cell-binding regions and prospects for inhibitor-binding studies (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 1568-1578
Leonidas, D. D., Chavali, G. B., Jardine, A. M., Li, S., Shapiro, R., Acharya, K. R., Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography (2001) Protein Sci., 10, pp. 1669-1676
Leland, P. A., Staniszewski, K. E., Park, C., Kelemen, B. R., Raines, R. T., The ribonucleolytic activity of angiogenin (2002) Biochemistry, 41, pp. 1343-1350
Schultz, L. W., Quirk, D. J., Raines, R. T., His. Asp catalytic dyad of ribonuclease A: Structure and function of the wild-type, D121N, and D121A enzymes (1998) Biochemistry, 37, pp. 8886-8898
Huang, Y. C., Lin, Y. M., Chang, T. W., Wu, S. J., Lee, Y. S., Chang, M. D., Chen, C., Liao, Y. D., The flexible and clustered lysine residues of human ribonuclease 7 are critical for membrane permeability and antimicrobial activity (2007) J. Biol. Chem., 282, pp. 4626-4633
Biochem J (ISSN: 1470-8728electronic, 0264-6021linking, 0264-6021print), 2011 Jan 15; 433(2): 345-355.
Export to BibTeX Export to EndNote
Paper type: Journal Article, Research Support, Non-U. S. Gov'T,
Impact factor: 4.897, 5-year impact factor: 4.693
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-78651266853&partnerID=40&md5=30a61a9b637299df0873584fb2dc55dc
Keywords: Angiogenin, Bactericidal Activity, Rnase, Vertebrate, Zebrafish (zf) (danio Rerio), Enzyme, Ribonuclease, Unclassified Drug, Article, Biological Activity, Controlled Study, Drug Structure, Human, Nonhuman, Priority Journal, Thermodynamics, Zebra Fish, Amino Acid Sequence, Animals, Cells, Cultured, Gene Expression Regulation, Developmental, Enzymologic, Models, Molecular, Molecular Sequence Data, Protein Structure, Tertiary, Pancreatic, Sequence Alignment, Pancreatic Chemistry, Genetics, Metabolism, Ribonucleases Chemistry, Embryology, Genetics Metabolism, Pancreatic Chemistry Genetics Metabolism, Ribonucleases Chemistry Genetics Metabolism, Zebrafish Embryology Genetics Metabolism,
Affiliations:
*** IBB - CNR ***
Dipartimento di Biologia Strutturale e Funzionale, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy
Dipartimento di Chimica, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy
Istituto di Biostrutture e Bioimmagini, Consiglio Nazionale Delle Ricerche (CNR), Via Mezzocannone 16, I-80134 Naples, Italy
References:
Pizzo, E., D'Alessio, G., The success of the RNase scaffold in the advance of biosciences and in evolution (2007) Gene, 406, pp. 8-1
Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., FitzHugh, W., Initial sequencing and analysis of the human genome (2001) Nature, 409, pp. 860-921
Cho, S., Zhang, J., Zebrafish ribonucleases are bactericidal: Implications for the origin of the vertebrate RNase A superfamily (2007) Mol. Biol. Evol., 24, pp. 1259-1268
Kazakou, K., Holloway, D.E., Prior, S.H., Subramanian, V., Acharya, K.R., Ribonuclease A homologues of the zebrafish: Polymorphism, crystal structures of two representatives and their evolutionary implications (2008) J. Mol. Biol., 380, pp. 206-222
Pizzo, E., Buonanno, P., Di Maro, A., Ponticelli, S., De Falco, S., Quarto, N., Cubellis, M.V., D'Alessio, G., Ribonucleases and angiogenins from fish (2006) J. Biol. Chem., 281, pp. 27454-27460
Pizzo, E., Varcamonti, M., Di Maro, A., Zanfardino, A., Giancola, C., D'Alessio, G., Ribonucleases with angiogenic and bactericidal activities from the Atlantic salmon (2008) FEBS J., 275, pp. 1283-1295
Kishikawa, H., Wu, D., Hu, G.F., Targeting angiogenin in therapy of amyotropic lateral sclerosis (2008) Expert Opin. Ther. Targets, 12, pp. 1229-1242
Fu, H., Feng, J., Liu, Q., Sun, F., Tie, Y., Zhu, J., Xing, R., Zheng, X., Stress induces tRNA cleavage by angiogenin in mammalian cells (2009) FEBS Lett., 583, pp. 437-442
Yamasaki, S., Ivanov, P., Hu, G.F., Anderson, P., Angiogenin cleaves tRNA and promotes stress-induced translational repression (2009) J. Cell Biol., 185, pp. 35-42
Quarto, N., Pizzo, E., D'Alessio, G., Temporal and spatial expression of RNases from zebrafish ( Danio rerio) (2008) Gene, 427, pp. 32-41
Covassin, L.D., Siekmann, A.F., Kacergis, M.C., Laver, E., Moore, J.C., Villefranc, J.A., Weinstein, B.M., Lawson, N.D., A genetic screen for vascular mutants in zebrafish reveals dynamic roles for Vegf/Plcg1 signaling during artery development (2009) Dev. Biol., 329, pp. 212-226
Lawson, N.D., Weinstein, B.M., Arteries and veins: Making a difference with zebrafish (2002) Nat. Rev. Genet., 3, pp. 674-682
Ny, A., Autiero, M., Carmeliet, P., Zebrafish and Xenopus tadpoles: Small animal models to study angiogenesis and lymphangiogenesis (2006) Exp. Cell Res., 312, pp. 684-693
Monti, D.M., Yu, W., Pizzo, E., Shima, K., Hu, M.G., Di Malta, C., Piccoli, R., Hu, G.F., Characterization of the angiogenic activity of zebrafish ribonucleases (2009) FEBS J., 276, pp. 4077-4090
Rosenberg, H.F., Recombinant human eosinophil cationic protein ribonuclease activity is not essential for cytotoxicity (1995) J. Biol. Chem., 270, pp. 7876-7881
Blank, A., Sugiyama, R.H., Dekker, C.A., Activity staining of nucleolytic enzymes after sodium dodecyl sulfate-polyacrylamide gel electrophoresis: Use of aqueous isopropanol to remove detergent from gels (1982) Anal. Biochem., 120, pp. 267-275
Kelemen, B.R., Klink, T.A., Behlke, M.A., Eubanks, S.R., Leland, P.A., Raines, R.T., Hypersensitive substrate for ribonucleases (1999) Nucleic Acids Res., 27, pp. 3696-3701
Venyaminov, S.Y., Yang, J.T., Determination of protein secondary structure (1996) Circular Dichroism and the Conformational Analysis of Biomolecules, pp. 69-107. , Fasman, G. D., ed., Plenum Press, New York
Barone, G., Del Vecchio, P., Fessas, D., Giancola, C., Graziano, G., THESEUS: A new software package for the handling and analysis of thermal denaturation data for biological macromolecules (1993) J. Thermal Anal., 39, pp. 2779-2790
Otwinowsky, Z., Minor, W., Processing of X-ray diffraction data collected in oscillation mode (1997) Methods in Enzymology, pp. 307-326. , Carter, Jr, C. W. and Sweet, R. M., eds, Academic Press, San Diego
McCoy, A.J., Grosse-Kunstleve, R.W., Storoni, L.C., Read, R.J., Likelihood-enhanced fast translation functions (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 458-464
Acharya, K.R., Shapiro, R., Riordan, J.F., Vallee, B.L., Crystal structure of bovine angiogenin at 1.5-Å resolution (1995) Proc. Natl. Acad. Sci U.S.A., 92, pp. 2949-2953
Brunger, A.T., Adams, P.D., Clore, G.M., DeLano, W.L., Gros, P., Grosse-Kunstleve, R.W., Jiang, J.S., Pannu, N.S., Crystallography & NMR system: A new software suite for macromolecular structure determination (1998) Acta Crystallogr. D Biol. Crystallogr., 54, pp. 905-921
Jones, T.A., Zou, J.Y., Cowan, S.W., Kjedgaard, M., Improved methods for binding protein models in electron density maps and the location of errors in these models (1991) Acta Crystallogr. D Biol. Crystallogr., 56, pp. 714-721
Laskowski, R.A., MacArthur, M.W., Moss, M.D., Thornton, J.M., PROCHECK: A program to check the stereochemical quality of protein structure (1993) J. Appl. Crystallogr., 26, pp. 283-291
Hooft, R.W., Vriend, G., Sander, C., Abola, E.E., Errors in protein structures (1996) Nature, 381, p. 272
Schwede, T., Kopp, J., Guex, N., Peitsch, M.C., SWISS-MODEL: An automated protein homology-modeling server (2003) Nucleic Acids Res., 31, pp. 3381-3385
Merlino, A., Graziano, G., Mazzarella, L., Structural and dynamic effects of α-helix deletion in Sso7d: Implications for protein thermal stability (2004) Proteins, 57, pp. 692-701
Porcelli, M., Moretti, M.A., Concilio, L., Forte, S., Merlino, A., Graziano, G., Cacciapuoti, G., S-adenosylhomocysteine hydrolase from the archaeon Pyrococcus furiosus: Biochemical characterization and analysis of protein structure by comparative molecular modeling (2005) Proteins, 58, pp. 815-825
Sippl, M.J., Recognition of errors in three-dimensional structures of proteins (1993) Proteins, 17, pp. 355-362
Sippl, M.J., Knowledge-based potentials for proteins (1995) Curr. Opin. Struct. Biol., 5, pp. 229-235
Berisio, R., Lamzin, V.S., Sica, F., Wilson, K.S., Zagari, A., Mazzarella, L., Protein titration in the crystal state (1999) J. Mol. Biol., 292, pp. 845-854
Holloway, D.E., Chavali, G.B., Hares, M.C., Subramanian, V., Acharya, K.R., Structure of murine angiogenin: Features of the substrate- and cell-binding regions and prospects for inhibitor-binding studies (2005) Acta Crystallogr. D Biol. Crystallogr., 61, pp. 1568-1578
Leonidas, D.D., Chavali, G.B., Jardine, A.M., Li, S., Shapiro, R., Acharya, K.R., Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography (2001) Protein Sci., 10, pp. 1669-1676
Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L., Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2′,5′)guanosine (2000) Protein Sci., 9, pp. 1217-1225
Mazzarella, L., Capasso, S., Demasi, D., Di Lorenzo, G., Mattia, C.A., Zagari, A., Bovine seminal ribonuclease. Structure at 1.9 Å resolution (1993) Acta Crystallogr. D Biol. Crystallogr., 49, pp. 389-402
Merlino, A., Mazzarella, L., Carannante, A., Di Fiore, A., Di Donato, A., Notomista, E., Sica, F., The importance of dynamic effects on the enzyme activity: X-ray structure and molecular dynamics of onconase mutants (2005) J. Biol. Chem., 280, pp. 17953-17960
Merlino, A., Vitagliano, L., Sica, F., Zagari, A., Mazzarella, L., Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer (2004) Biopolymers, 73, pp. 689-695
Barone, G., Catanzano, F., Del Vecchio, P., Giancola, C., Graziano, G., Thermodynamics of protein stability: A family of ribonucleases (1997) Pure Appl. Chem., 69, pp. 2307-2313
Crabtree, B., Thiyagarajan, N., Prior, S.H., Wilson, P., Iyer, S., Ferns, T., Shapiro, R., Acharya, K.R., Characterization of human angiogenin variants implicated in amyotrophic lateral sclerosis (2007) Biochemistry, 46, pp. 11810-11818
Leland, P.A., Staniszewski, K.E., Park, C., Kelemen, B.R., Raines, R.T., The ribonucleolytic activity of angiogenin (2002) Biochemistry, 41, pp. 1343-1350
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A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish
Recently, extracellular RNases of the RNase A superfamily, with the characteristic CKxxNTF sequence signature, have been identified in fish. This has led to the recognition that these RNases are present in the whole vertebrate subphylum. In fact, they comprise the only enzyme family unique to vertebrates. Four RNases from zebrafish (Danio rerio) have been previously reported and have a very low RNase activity; some of these are endowed, like human angiogenin, with powerful angiogenic and bactericidal activities. In the present paper, we report the three-dimensional structure, the thermodynamic behaviour and the biological properties of a novel zebrafish RNase, ZF-RNase-5. The investigation of its structural and functional properties, extended to all other subfamily members, provides an inclusive description of the whole zebrafish RNase subfamily. The Authors Journal compilation 2011 Biochemical Society
Recently, extracellular RNases of the RNase A superfamily, with the characteristic CKxxNTF sequence signature, have been identified in fish. This has led to the recognition that these RNases are present in the whole vertebrate subphylum. In fact, they comprise the only enzyme family unique to vertebrates. Four RNases from zebrafish (Danio rerio) have been previously reported and have a very low RNase activity; some of these are endowed, like human angiogenin, with powerful angiogenic and bactericidal activities. In the present paper, we report the three-dimensional structure, the thermodynamic behaviour and the biological properties of a novel zebrafish RNase, ZF-RNase-5. The investigation of its structural and functional properties, extended to all other subfamily members, provides an inclusive description of the whole zebrafish RNase subfamily. The Authors Journal compilation 2011 Biochemical Society
A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish
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A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish
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Esposito L, Daggett V
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Merlino A, Ceruso MA, Vitagliano L, Mazzarella L
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Sica F, Di Fiore A, Merlino A, Mazzarella L
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Pedone E, Ren B, Ladenstein R, Rossi M, Bartolucci S
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Merlino A, Vitagliano L, Sica F, Zagari A, Mazzarella L
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Merlino A, Vitagliano L, Ceruso MA, Mazzarella L
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Berisio R, Sica F, De Lorenzo C, Di Fiore A, Piccoli R, Zagari A, Mazzarella L
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Merlino A, Vitagliano L, Ceruso MA, Mazzarella L
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Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2003 Oct 1; 53(1): 101-110.
Impact Factor: 4.313
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Sica F, Di Fiore A, Zagari A, Mazzarella L
* The unswapped chain of bovine seminal ribonuclease: Crystal structure of the free and liganded monomeric derivative (355 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2003 Sep 1; 52(2): 263-271.
Impact Factor: 4.313
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Spalletti-cernia D, Sorrentino R, Di Gaetano S, Arciello A, Garbi C, Piccoli R, D'Alessio G, Vecchio G, Laccetti P, Santoro M
* Antineoplastic ribonucleases selectively kill thyroid carcinoma cells via caspase-mediated induction of apoptosis (393 views)
Journal Of Clinical Endocrinology & Metabolism (ISSN: 0021-972x), 2003 Jun; 88(6): 2900-2907.
Impact Factor: 5.873
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Borgatti M, Romanelli A, Saviano M, Pedone C, Lampronti I, Breda L, Nastruzzi C, Bianchi N, Mischiati C, Gambari R
* Resistance of decoy PNA-DNA chimeras to enzymatic degradation in cellular extracts and serum (430 views)
Oncology Research (ISSN: 0965-0407), 2003; 13(5): 279-287.
Impact Factor: 1.794
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Merlino A, Vitagliano L, Ceruso M, Di Nola A, Mazzarella L
* Global and local motions in ribonuclease A: A molecular dynamics study (411 views)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2002 Nov 15; 65(4): 274-283.
Impact Factor: 2.372
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Vitagliano L, Merlino A, Zagari A, Mazzarella L
* Reversible substrate-induced domain motions in ribonuclease (345 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2002 Jan 1; 46(1): 97-104.
Impact Factor: 4.096
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Berisio R, Sica F, Lamzin VS, Wilson KS, Zagari A, Mazzarella L
* Atomic resolution structures of ribonuclease A at six pH values (650 views)
Acta Crystallogr D Biol Crystallogr (ISSN: 0907-4449, 0907-4449linking), 2002; 58(3): 441-450.
Impact Factor: 1.76
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Ogawa R, Pacelli R, Espey MG, Miranda KM, Friedman N, Kim SM, Cox G, Mitchell JB, Wink DA, Russo A
* Comparison of control of Listeria by nitric oxide redox chemistry from murine macrophages and no donors: Insights into listeriocidal activity of oxidative and nitrosative stress (776 views)
Free Radic Biol Med (ISSN: 0891-5849, 0891-5849linking, 1873-4596electronic), 2001 Feb 1; 30(3): 268-276.
Impact Factor: 5.082
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Orru S, Vitagliano L, Esposito L, Mazzarella L, Marino G, Ruoppolo M
Effect of deamidation on folding of ribonuclease (388 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Dec; 9(12): 2577-2582.
Impact Factor: 3.869
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Esposito L, Vitagliano L, Zagari A, Mazzarella L
Experimental evidence for the correlation of bond distances in peptide groups detected in ultrahigh-resolution protein structures (301 views)
Protein Eng (ISSN: 0269-2139, 0269-2139print, 0269-2139linking), 2000 Dec; 13(12): 825-828.
Impact Factor: 2.442
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Esposito L, Vitagliano L, Zagari A, Mazzarella L
Pyramidalization of backbone carbonyl carbon atoms in proteins (451 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Oct; 9(10): 2038-2042.
Impact Factor: 3.869
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Vitagliano L, Merlino A, Zagari A, Mazzarella L
Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2 ', 5 ')guanosine (680 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Jun; 9(6): 1217-1225.
Impact Factor: 3.869
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Esposito L, Vitagliano L, Sica F, Sorrentino G, Zagari A, Mazzarella L
The ultrahigh resolution crystal structure of ribonuclease A containing an isoaspartyl residue: Hydration and sterochemical analysis (724 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 2000 Mar 31; 297(3): 713-732.
Impact Factor: 5.388
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ZagariA, Berisio R, Merlino A, Sica F, Vitagliano L, Mazzarella L
Reversible domain motions induced by substrate binding in ribonuclease (328 views)
Acta Crystallographica Section A, 2000; 56: 263-263.
Impact Factor: 2.33
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Vitagliano L, Adinolfi S, Sica F, Merlino A, Zagari A, Mazzarella L
A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease (384 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1999 Oct 29; 293(3): 569-577.
Impact Factor: 5.501
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Berisio R, Lamzin VS, Sica F, Wilson KS, Zagari A, Mazzarella L
Protein titration in the crystal state (480 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1999 Oct 1; 292(4): 845-854.
Impact Factor: 5.501
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Sica F, Adinolfi S, Berisio R, De Lorenzo C, Mazzarella L, Piccoli R, Vitagliano L, Zagari A
Crystallization of multiple forms of bovine seminal ribonuclease in the liganded and unliganded state (297 views)
J Cryst Growth (ISSN: 0022-0248), 1999; 196(2-4): 305-312.
Impact Factor: 1.492
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Vitagliano L, Adinolfi S, Riccio A, Sica F, Zagari A, Mazzarella L
Binding of a substrate analog to a domain swapping protein: X-ray structure of the complex of bovine seminal ribonuclease with uridylyl(2 ', 5 ')adenosine (465 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 1998 Sep; 7(8): 1691-1699.
Impact Factor: 4.44
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Adinolfi S, Piccoli R, Sica F, Mazzarella L
BS-RNase tetramers: An example of domain-swapped oligomers (421 views)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 1996 Dec 2; 398(2-3): 326-332.
Impact Factor: 3.504
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Sica F, Adinolfi S, Vitagliano L, Zagari A, Capasso S, Mazzarella L
Cosolute effect on crystallization of two dinucleotide complexes of bovine seminal ribonuclease from concentrated salt solutions (294 views)
J Cryst Growth (ISSN: 0022-0248), 1996; 168(1-4): 192-197.
Impact Factor: 1.259
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Capasso S, Di Donato A, Esposito L, Sica F, Sorrentino G, Vitagliano L, Zagari A, Mazzarella L
Deamidation in proteins: The crystal structure of bovine pancreatic ribonuclease with an isoaspartyl residue at position 67 (488 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1996; 257(3): 492-496.
Impact Factor: 5.673
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Pacelli R, Wink DA, Cook JA, Krishna MC, DeGraff W, Friedman N, Tsokos M, Samuni A, Mitchell JB
NITRIC-OXIDE POTENTIATES HYDROGEN PEROXIDE-INDUCED KILLING OF ESCHERICHIA-COLI (428 views)
Journal Of Experimental Medicine (ISSN: 0022-1007), 1995 Nov 1; 182(5): 1469-1479.
Impact Factor: 14.384
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Lauro GM, Fonti R, Margotta V
Phylogenetic evolution of intermediate filament associated proteins in ependymal cells of several adult poikilotherm vertebrates (400 views)
Journal Fur Hirnforschung (ISSN: 0021-8359), 1991; 32(2): 257-261.
Impact Factor: 0
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Sandomenico A, Ruggiero A, Iaccarino E, Oliver A, Squeglia F, Moreira M, Esposito L, Ruvo M, Berisio R
Unveiling CD59-Antibody Interactions to Design Paratope-Mimicking Peptides for Complement Modulation (2 views)
Int J Mol Sci (ISSN: 1422-0067linking), N/D; 21222223241031126119: 500-519.
Impact Factor: 6.21
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* A Structural View of SARS-CoV-2 RNA Replication Machinery: RNA Synthesis, Proofreading and Final Capping (491 views)
Cells (ISSN: 2073-4409linking, 2073-4409electronic), 2020 May 20; 9(5): 1297-1297.
Impact Factor: 6.6
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Calvanese L, Squeglia F, Romano M, D'Auria G, Falcigno L, Berisio R
* Structural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulence (216 views) (PDF 10 views)
J Biomol Struct Dyn (ISSN: 0739-1102linking, 1538-0254electronic), 2020; N/D: 1-19.
Impact Factor: 3.11
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Esposito L, Donnarumma F, Ruggiero A, Leone S, Vitagliano L, Picone D
* Structure, stability and aggregation propensity of a Ribonuclease A-Onconase chimera (292 views)
Int J Biol Macromol (ISSN: 0141-8130linking, 1879-0003electronic), 2019 Jul 15; 133: 1125-1133.
Impact Factor: 4.784
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Ruggiero A, Garcia-ortega L, Moreira M, Ragucci S, Landi N, Di Maro A, Berisio R
* Binding and enzymatic properties of Ageritin, a fungal ribotoxin with novel zinc-dependent function (196 views)
Int J Biol Macromol (ISSN: 0141-8130linking, 1879-0003electronic), 2019 Jun 18; 136: 625-631.
Impact Factor: 4.78
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Ruggiero A, Garcia-ortega L, Ragucci S, Russo R, Landi N, Berisio R, Di Maro A
* Structural and enzymatic properties of Ageritin, a novel metal-dependent ribotoxin-like protein with antitumor activity (348 views)
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Impact Factor: 3.679
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Monti M, De Rosa V, Iommelli F, Carriero MV, Terlizzi C, Camerlingo R, Belli S, Fonti R, Di Minno G, Del Vecchio S
* Neutrophil Extracellular Traps as an Adhesion Substrate for Different Tumor Cells Expressing RGD-Binding Integrins (268 views)
Int J Mol Sc (ISSN: 1422-0067linking, 1422-0067electronic, 1661-6596), 2018 Aug 9; 19(8): N/D-N/D.
Impact Factor: 3.687
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Satriano C, Munzone A, Cucci LM, Giacomelli C, Trincavelli ML, Martini C, Rizzarelli E, La Mendola D
* Angiogenin-mimetic peptide functionalised gold nanoparticles for cancer therapy applications (185 views)
Microchemical Journal (ISSN: 0026-265x), 2018; 136: 157-163.
Impact Factor: 2.579
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Picone D, Donnarumma F, Ferraro G, Gotte G, Fagagnini A, Butera G, Donadelli M, Merlino A
* A comparison study on RNase A oligomerization induced by cisplatin, carboplatin and oxaliplatin (343 views)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 2017 Aug; 173: 105-112.
Impact Factor: 3.063
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Magrì A, Tabbì G, Breglia R, De Gioia L, Fantucci P, Bruschi M, Bonomo RP, La Mendola D
* Copper ion interaction with the RNase catalytic site fragment of the angiogenin protein: an experimental and theoretical investigation (389 views) (PDF 179 views)
Dalton T (ISSN: 1477-9226, 1477-9234, 1477-9226linking), 2017 Jul 04; 46(26): 8524-8538.
Impact Factor: 4.099
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Monti M, Iommelli F, De Rosa V, Carriero MV, Miceli R, Camerlingo R, Di Minno G, Del Vecchio S
* Integrin-dependent cell adhesion to neutrophil extracellular traps through engagement of fibronectin in neutrophil-like cells (392 views)
Plosone (ISSN: 1932-6203, 1932-6203electronic, 1932-6203linking), 2017 Feb; 12(2): 1-15.
Impact Factor: 2.766
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Musumeci D, Platella C, Riccardi C, Moccia F, Montesarchio D
* Fluorescence sensing using DNA Aptamers in cancer research and clinical diagnostics (273 views)
Cancers (ISSN: 2072-6694, 2072-6694linking), 2017; 9(12): N/D-N/D.
Impact Factor: 5.326
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La Mendola D, Arnesano F, Hansson O, Giacomelli C, Calo V, Mangini V, Magrì A, Bellia F, Trincavelli ML, Martini C, Natile G, Rizzarelli E
* Copper binding to naturally occurring, lactam form of angiogenin differs from that to recombinant protein, affecting their activity (407 views)
Metallomics (ISSN: 1756-5901, 1756-591x), 2016 Jan 20; 8(1): 118-124.
Impact Factor: 3.975
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Romano M, Squeglia F, Berisio R
* Structure and Function of RNase AS, a Novel Virulence Factor from Mycobacterium Tuberculosis (405 views)
Curr Med Chem (ISSN: 0929-8673, 1875-533x, 1875-533xelectronic), 2015 Apr 17; 22(14): 1745-1756.
Impact Factor: 3.455
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Giacomelli C, Trincavelli ML, Satriano C, Hansson O, La Mendola D, Rizzarelli E, Martini C
* Copper (II) ions modulate Angiogenin activity in human endothelial cells (424 views)
Int J Biochem Cell B (ISSN: 1357-2725), 2015 Mar; 60: 185-196.
Impact Factor: 3.905
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Galdiero E, Maselli V, Falanga A, Gesuele R, Galdiero S, Fulgione D, Guida M
* Integrated analysis of the ecotoxicological and genotoxic effects of the antimicrobial peptide melittin on Daphnia magna and Pseudokirchneriella subcapitata (630 views)
Environ Pollut (ISSN: 0269-7491), 2015; 203: 145-152.
Impact Factor: 4.839
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Messori L, Marzo T, Merlino A
* Interactions of carboplatin and oxaliplatin with proteins: Insights from X-ray structures and mass spectrometry studies of their ribonuclease A adducts (312 views)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 2015; N/D: N/D-N/D.
Impact Factor: 3.205
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Di Lorenzo F, Silipo A, Bianconi I, Lore' NI, Scamporrino A, Sturiale L, Garozzo D, Lanzetta R, Parrilli M, Bragonzi A, Molinaro A
* Persistent cystic fibrosis isolate Pseudomonas aeruginosa strain RP73 exhibits an under-acylated LPS structure responsible of its low inflammatory activity (367 views)
Mol Immunol (ISSN: 0161-5890), 2015; 63(2): 166-175.
Impact Factor: 3.375
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Picone D, Donnarumma F, Ferraro G, Russo Krauss I, Fagagnini A, Gotte G, Merlino A
* Platinated oligomers of bovine pancreatic ribonuclease: Structure and stability (414 views)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 2015; 146: 37-43.
Impact Factor: 3.205
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Romano M, Van De Weerd R, Brouwer FCC, Roviello GN, Lacroix R, Sparrius M, Van Den Brink-van Stempvoort G, Maaskant JJ, Van Der Sar AM, Appelmelk BJ, Geurtsen JJ, Berisio R
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Structure (ISSN: 0969-2126, 1878-4186, 0969-2126linking), 2014 May 6; 22(5): 719-730.
Impact Factor: 5.618
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Messori L, Scaletti F, Massai L, Cinellu MA, Russo Krauss I, Di Martino G, Vergara A, Paduano L, Merlino A
* Interactions of gold-based drugs with proteins: crystal structure of the adduct formed between ribonuclease A and a cytotoxic gold(III) compound (340 views)
Metallomics (ISSN: 1756-5901, 1756-591x), 2014; 6(2): 233-236.
Impact Factor: 3.585
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Sica F, Pica A, Merlino A, Russo Krauss I, Ercole C, Picone D
* The multiple forms of bovine seminal ribonuclease: Structure and stability of a C-terminal swapped dimer (328 views)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 2013 Nov 29; 587(23): 3755-3762.
Impact Factor: 3.341
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Vergara A, Russo Krauss I, Montesarchio D, Paduano L, Merlino A
* Investigating the Ruthenium Metalation of Proteins: X-ray Structure and Raman Microspectroscopy of the Complex between RNase A and AziRu (309 views)
Inorg Chem (ISSN: 0020-1669, 1520-510x, 1520-510xelectronic), 2013 Oct 7; 52(19): 10714-10716.
Impact Factor: 4.794
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Pica A, Merlino A, Buell AK, Knowles TJ, Pizzo E, D'Alessio G, Sica F, Mazzarella L
* Three-dimensional domain swapping and supramolecular protein assembly: insights from the X-ray structure of a dimeric swapped variant of human pancreatic RNase (1023 views)
Acta Crystallogr D Biol Crystallogr (ISSN: 0907-4449, 0907-4449linking), 2013 Oct; 69: 2116-2123.
Impact Factor: 7.232
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Balasco N, Esposito L, De Simone A, Vitagliano L
* Role of loops connecting secondary structure elements in the stabilization of proteins isolated from thermophilic organisms (353 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2013 Jul; 22(7): 1016-1023.
Impact Factor: 2.861
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Balasco N, Esposito L, De Simone A, Vitagliano L
* FOR the RECORD: Role of loops connecting secondary structure elements in the stabilization of proteins isolated from thermophilic organisms (620 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2013; 22(7): 1016-1023.
Impact Factor: 2.861
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Merlino A, Picone D, Ercole C, Balsamo A, Sica F
* Chain termini cross-talk in the swapping process of bovine pancreatic ribonuclease (284 views)
Biochimie (ISSN: 0300-9084, 1638-6183, 1638-6183electronic), 2012 May; 94(5): 1108-1118.
Impact Factor: 3.142
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La Mendola D, Farkas D, Bellia F, Magri A, Travaglia A, Hansson O, Rizzarelli E
* Probing the copper(II) binding features of angiogenin. Similarities and differences between a N-terminus peptide fragment and the recombinant human protein (469 views)
Inorg Chem (ISSN: 1520-510x, 0020-1669, 1520-510xelectronic), 2012 Jan 2; 51(1): 128-141.
Impact Factor: 4.593
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D'Errico G, Ercole C, Lista M, Pizzo E, Falanga A, Galdiero S, Spadaccini R, Picone D
* Enforcing the positive charge of N-termini enhances membrane interaction and antitumor activity of bovine seminal ribonuclease (558 views)
Bba-Gen Subjects (ISSN: 0005-2736, 0006-3002, 0925-4439), 2011 Dec; 1808(12): 3007-3015.
Impact Factor: 3.99
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Troise F, Monti M, Merlino A, Cozzolino F, Fedele C, Russo Krauss I, Sica F, Pucci P, D'Alessio G, De Lorenzo C
* A novel ErbB2 epitope targeted by human antitumor immunoagents (403 views)
Febs Journal (ISSN: 1742-464x), 2011 Apr; 278(7): 1156-1166.
Impact Factor: 3.79
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Varriale S, Merlino A, Coscia MR, Mazzarella L, Oreste U
* An evolutionary conserved motif is responsible for Immunoglobulin heavy chain packing in the B cell membrane (497 views)
Molecular Phylogenetics And Evolution (ISSN: 1055-7903), 2010 Dec; 57(3): 1238-1244.
Impact Factor: 3.889
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La Mendola D, Magrì A, Vagliasindi LI, Hansson Ö, Bonomo RP, Rizzarelli E
* Copper(II) complex formation with a linear peptide encompassing the putative cell binding site of angiogenin (449 views)
Dalton T (ISSN: 1477-9234, 1477-9226, 1477-9234electronic), 2010 Nov 28; 39(44): 10678-10684.
Impact Factor: 3.647
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Merlino A, Russo Krauss I, Perillo M, Mattia CA, Ercole C, Picone D, Vergara A, Sica F
* Toward an Antitumor Form of Bovine Pancreatic Ribonuclease: The Crystal Structure of Three Noncovalent Dimeric Mutants (399 views)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2009 Dec; 91(12): 1029-1037.
Impact Factor: 2.605
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Merlino A, Avella G, Di Gaetano S, Arciello A, Piccoli R, Mazzarella L, Sica F
* Structural features for the mechanism of antitumor action of a dimeric human pancreatic ribonuclease variant (369 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic, 0961-8368linking), 2009 Jan; 18(1): 50-57.
Impact Factor: 2.937
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Dalla Serra M, Cirioni O, Vitale RM, Renzone G, Coraiola M, Giacometti A, Potrich C, Baroni E, Guella G, Sanseverino M, De Luca S, Scalise G, Amodeo P, Scaloni A
* Structural features of distinctin affecting peptide biological and biochemical properties (632 views)
Biochemistry (ISSN: 0006-2960, 1520-4995, 1520-4995electronic), 2008 Jul 29; 47(30): 7888-7899.
Impact Factor: 3.379
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Merlino A, Ercole C, Picone D, Pizzo E, Mazzarella L, Sica F
* The buried diversity of bovine seminal ribonuclease: Shape and cytotoxicity of the swapped non-covalent form of the enzyme (548 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 2008 Feb 15; 376(2): 427-437.
Impact Factor: 4.146
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Ruggiero A, Chambery A, Di Maro A, Mastroianni A, Parente A, Berisio R
* Crystallization and preliminary X-ray diffraction analysis of PD-L1, a highly glycosylated ribosome inactivating protein with DNase activity (487 views)
Protein Pept Lett (ISSN: 0929-8665, 1875-5305), 2007; 14(4): 407-409.
Impact Factor: 1.097
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Bucci E, Vitagliano L, Barone R, Sorrentino S, D'Alessio G, Graziano G
* On the thermal stability of the two dimeric forms of ribonuclease (451 views)
Biophys Chem (ISSN: 0301-4622, 0301-4622linking), 2005 Jul 1; 116(2): 89-95.
Impact Factor: 1.925
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Naddeo M, Vitagliano L, Russo A, Gotte G, D'Alessio G, Sorrentino S
* Interactions of the cytotoxic RNase A dimers with the cytosolic ribonuclease inhibitor (408 views)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 2005 May 9; 579(12): 2663-2668.
Impact Factor: 3.415
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Merlino A, Mazzarella L, Carannante A, Di Fiore A, Di Donato A, Notomista E, Sica F
* The importance of dynamic effects on the enzyme activity: X-ray structure and molecular dynamics of onconase mutants (442 views)
Jbc Papers (ISSN: 0021-9258, 1083-351x, 0021-9258linking), 2005 May 6; 280(18): 17953-17960.
Impact Factor: 5.854
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Picone D, Di Fiore A, Ercole C, Franzese M, Sica F, Tomaselli S, Mazzarella L
* The role of the hinge loop in domain swapping - The special case of bovine seminal ribonuclease (376 views)
Jbc Papers (ISSN: 0021-9258, 1083-351x, 0021-9258linking), 2005 Apr 8; 280(14): 13771-13778.
Impact Factor: 5.854
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Esposito L, Daggett V
* Insight into ribonuclease A domain swapping by molecular dynamics unfolding simulations (446 views)
Biochemistry (ISSN: 0006-2960, 1520-4995, 1520-4995electronic), 2005 Mar 8; 44(9): 3358-3368.
Impact Factor: 3.848
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Merlino A, Ceruso MA, Vitagliano L, Mazzarella L
* Open interface and large quaternary structure movements in 3D domain swapped proteins: Insights from molecular dynamics simulations of the C-terminal swapped dimer of ribonuclease (605 views)
Biophysical Journal (ISSN: 0006-3495, 1542-0086), 2005 Mar; 88(3): 2003-2012.
Impact Factor: 4.507
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Sica F, Di Fiore A, Merlino A, Mazzarella L
* Structure and stability of the non-covalent swapped dimer of bovine seminal ribonuclease - An enzyme tailored to evade ribonuclease protein inhibitor (443 views)
Jbc Papers (ISSN: 0021-9258, 1083-351x, 0021-9258linking), 2004 Sep 27; 279(35): 36753-36760.
Impact Factor: 6.355
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Pedone E, Ren B, Ladenstein R, Rossi M, Bartolucci S
* Functional properties of the protein disulfide oxidoreductase from the archaeon Pyrococcus furiosus - A member of a novel protein family related to protein disulfide-isomerase (393 views)
Eur J Biochem (ISSN: 0014-2956, 0014-2956print), 2004 Sep; 271(16): 3437-3448.
Impact Factor: 3.26
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Vitagliano L, Bonomi G, Riccio A, di Prisco G, Smulevich G, Mazzarella L
* The oxidation process of Antarctic fish hemoglobins (454 views)
Eur J Biochem (ISSN: 0014-2956, 0014-2956print), 2004 May; 271(9): 1651-1659.
Impact Factor: 3.26
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Merlino A, Vitagliano L, Sica F, Zagari A, Mazzarella L
* Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer (385 views)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2004 Apr 15; 73(6): 689-695.
Impact Factor: 2.863
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Merlino A, Vitagliano L, Ceruso MA, Mazzarella L
* Dynamic properties of the N-terminal swapped dimer of ribonuclease (373 views)
Biophysical Journal (ISSN: 0006-3495, 1542-0086), 2004 Apr; 86(4): 2383-2391.
Impact Factor: 4.585
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Berisio R, Sica F, De Lorenzo C, Di Fiore A, Piccoli R, Zagari A, Mazzarella L
* Crystal Structure Of The Dimeric Un-Swapped Form Of Bovine Seminal Ribonuclease (385 views)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 2003 Nov 6; 554(1-2): 105-110.
Impact Factor: 3.609
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Merlino A, Vitagliano L, Ceruso MA, Mazzarella L
* Subtle functional collective motions in pancreatic-like ribonucleases: From ribonuclease A to angiogenin (386 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2003 Oct 1; 53(1): 101-110.
Impact Factor: 4.313
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Sica F, Di Fiore A, Zagari A, Mazzarella L
* The unswapped chain of bovine seminal ribonuclease: Crystal structure of the free and liganded monomeric derivative (355 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2003 Sep 1; 52(2): 263-271.
Impact Factor: 4.313
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Spalletti-cernia D, Sorrentino R, Di Gaetano S, Arciello A, Garbi C, Piccoli R, D'Alessio G, Vecchio G, Laccetti P, Santoro M
* Antineoplastic ribonucleases selectively kill thyroid carcinoma cells via caspase-mediated induction of apoptosis (393 views)
Journal Of Clinical Endocrinology & Metabolism (ISSN: 0021-972x), 2003 Jun; 88(6): 2900-2907.
Impact Factor: 5.873
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Borgatti M, Romanelli A, Saviano M, Pedone C, Lampronti I, Breda L, Nastruzzi C, Bianchi N, Mischiati C, Gambari R
* Resistance of decoy PNA-DNA chimeras to enzymatic degradation in cellular extracts and serum (430 views)
Oncology Research (ISSN: 0965-0407), 2003; 13(5): 279-287.
Impact Factor: 1.794
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Merlino A, Vitagliano L, Ceruso M, Di Nola A, Mazzarella L
* Global and local motions in ribonuclease A: A molecular dynamics study (411 views)
Biopolymers (ISSN: 0006-3525, 0006-6352, 0006-3525print), 2002 Nov 15; 65(4): 274-283.
Impact Factor: 2.372
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Vitagliano L, Merlino A, Zagari A, Mazzarella L
* Reversible substrate-induced domain motions in ribonuclease (345 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2002 Jan 1; 46(1): 97-104.
Impact Factor: 4.096
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Berisio R, Sica F, Lamzin VS, Wilson KS, Zagari A, Mazzarella L
* Atomic resolution structures of ribonuclease A at six pH values (650 views)
Acta Crystallogr D Biol Crystallogr (ISSN: 0907-4449, 0907-4449linking), 2002; 58(3): 441-450.
Impact Factor: 1.76
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Ogawa R, Pacelli R, Espey MG, Miranda KM, Friedman N, Kim SM, Cox G, Mitchell JB, Wink DA, Russo A
* Comparison of control of Listeria by nitric oxide redox chemistry from murine macrophages and no donors: Insights into listeriocidal activity of oxidative and nitrosative stress (776 views)
Free Radic Biol Med (ISSN: 0891-5849, 0891-5849linking, 1873-4596electronic), 2001 Feb 1; 30(3): 268-276.
Impact Factor: 5.082
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Orru S, Vitagliano L, Esposito L, Mazzarella L, Marino G, Ruoppolo M
Effect of deamidation on folding of ribonuclease (388 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Dec; 9(12): 2577-2582.
Impact Factor: 3.869
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Esposito L, Vitagliano L, Zagari A, Mazzarella L
Experimental evidence for the correlation of bond distances in peptide groups detected in ultrahigh-resolution protein structures (301 views)
Protein Eng (ISSN: 0269-2139, 0269-2139print, 0269-2139linking), 2000 Dec; 13(12): 825-828.
Impact Factor: 2.442
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Esposito L, Vitagliano L, Zagari A, Mazzarella L
Pyramidalization of backbone carbonyl carbon atoms in proteins (451 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Oct; 9(10): 2038-2042.
Impact Factor: 3.869
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Vitagliano L, Merlino A, Zagari A, Mazzarella L
Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2 ', 5 ')guanosine (680 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 2000 Jun; 9(6): 1217-1225.
Impact Factor: 3.869
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Esposito L, Vitagliano L, Sica F, Sorrentino G, Zagari A, Mazzarella L
The ultrahigh resolution crystal structure of ribonuclease A containing an isoaspartyl residue: Hydration and sterochemical analysis (724 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 2000 Mar 31; 297(3): 713-732.
Impact Factor: 5.388
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ZagariA, Berisio R, Merlino A, Sica F, Vitagliano L, Mazzarella L
Reversible domain motions induced by substrate binding in ribonuclease (328 views)
Acta Crystallographica Section A, 2000; 56: 263-263.
Impact Factor: 2.33
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Vitagliano L, Adinolfi S, Sica F, Merlino A, Zagari A, Mazzarella L
A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease (384 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1999 Oct 29; 293(3): 569-577.
Impact Factor: 5.501
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Berisio R, Lamzin VS, Sica F, Wilson KS, Zagari A, Mazzarella L
Protein titration in the crystal state (480 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1999 Oct 1; 292(4): 845-854.
Impact Factor: 5.501
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Sica F, Adinolfi S, Berisio R, De Lorenzo C, Mazzarella L, Piccoli R, Vitagliano L, Zagari A
Crystallization of multiple forms of bovine seminal ribonuclease in the liganded and unliganded state (297 views)
J Cryst Growth (ISSN: 0022-0248), 1999; 196(2-4): 305-312.
Impact Factor: 1.492
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Vitagliano L, Adinolfi S, Riccio A, Sica F, Zagari A, Mazzarella L
Binding of a substrate analog to a domain swapping protein: X-ray structure of the complex of bovine seminal ribonuclease with uridylyl(2 ', 5 ')adenosine (465 views)
Protein Sci (ISSN: 0961-8368, 1469-896xelectronic), 1998 Sep; 7(8): 1691-1699.
Impact Factor: 4.44
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Adinolfi S, Piccoli R, Sica F, Mazzarella L
BS-RNase tetramers: An example of domain-swapped oligomers (421 views)
Febs Lett (ISSN: 0014-5793, 0014-5793print, 1873-3468electronic), 1996 Dec 2; 398(2-3): 326-332.
Impact Factor: 3.504
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Sica F, Adinolfi S, Vitagliano L, Zagari A, Capasso S, Mazzarella L
Cosolute effect on crystallization of two dinucleotide complexes of bovine seminal ribonuclease from concentrated salt solutions (294 views)
J Cryst Growth (ISSN: 0022-0248), 1996; 168(1-4): 192-197.
Impact Factor: 1.259
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Capasso S, Di Donato A, Esposito L, Sica F, Sorrentino G, Vitagliano L, Zagari A, Mazzarella L
Deamidation in proteins: The crystal structure of bovine pancreatic ribonuclease with an isoaspartyl residue at position 67 (488 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1996; 257(3): 492-496.
Impact Factor: 5.673
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Pacelli R, Wink DA, Cook JA, Krishna MC, DeGraff W, Friedman N, Tsokos M, Samuni A, Mitchell JB
NITRIC-OXIDE POTENTIATES HYDROGEN PEROXIDE-INDUCED KILLING OF ESCHERICHIA-COLI (428 views)
Journal Of Experimental Medicine (ISSN: 0022-1007), 1995 Nov 1; 182(5): 1469-1479.
Impact Factor: 14.384
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Lauro GM, Fonti R, Margotta V
Phylogenetic evolution of intermediate filament associated proteins in ependymal cells of several adult poikilotherm vertebrates (400 views)
Journal Fur Hirnforschung (ISSN: 0021-8359), 1991; 32(2): 257-261.
Impact Factor: 0
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Sandomenico A, Ruggiero A, Iaccarino E, Oliver A, Squeglia F, Moreira M, Esposito L, Ruvo M, Berisio R
Unveiling CD59-Antibody Interactions to Design Paratope-Mimicking Peptides for Complement Modulation (2 views)
Int J Mol Sci (ISSN: 1422-0067linking), N/D; 21222223241031126119: 500-519.
Impact Factor: 6.21
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72 Records (71 excluding Abstracts).
Total impact factor: 286.608 (284.278 excluding Abstracts).
Total 5 year impact factor: 276.751 (274.421 excluding Abstracts).
Total impact factor: 286.608 (284.278 excluding Abstracts).
Total 5 year impact factor: 276.751 (274.421 excluding Abstracts).
850 views. Last view on Monday 29 May 2023, 21:16:22
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