Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form (305 views)
Nucleosides Nucleotides Nucleic Acids (ISSN: 1744-3091, 1744-4309), 2010 Nov; 66: 1536-1540.
Export to BibTeX Export to EndNote
Paper type: Journal Article,
Impact factor: 0.563, 5-year impact factor: 0.479
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-78149334465&partnerID=40&md5=425cb4677aaad1ff480b15e08ecf146e
Keywords: Cold Adaptation, Eleginops Maclovinus, Haemichrome, Haemoglobin, Oxygen Affinity, Raman Microspectroscopy, Carboxyhemoglobin, Animal, Chemistry, Conference Paper, Crystallization, Perciformes, Raman Spectrometry, X Ray Crystallography, X-Ray, Spectrum Analysis,
Affiliations:
*** IBB - CNR ***
Department of Chemistry, University of Naples Federico II, 80126 Naples, Italy
Istituto di Biostrutture e Bioimmagini, CNR, 80134 Naples, Italy
Institute of Protein Biochemistry, CNR, 80131 Naples, Italy
References:
Bonaventura, C., Crumbliss, A.L., Weber, R.E., (2004) Acta Physiol. Scand., 182, pp. 245-25
Brickie, P., Arkhipkin, A.I., Shcherbich, Z.N., (2005) J. Mar. Biol. Assoc. U. K., 85, pp. 1217-1221
Brittain, T., (2005) J. Inorg. Biochem., 99, pp. 120-129
Camardella, L., Caruso, C., D'Avino, R., Di Prisco, G., Rutigliano, B., Tamburrini, M., Fermi, G., Perutz, M.R., (1992) J Mol. Biol., 224, p. 449460
Cheng, C.-H.C., Chen, L., Near, T., Jin, Y., (2003) Mol. Biol. Evol., 20, pp. 1897-1908
Coppola, D., Giordano, D., Vergara, A., Mazzarella, L., Di Prisco, G., Verde, C., Russo, R., (2010) Polar Sci., 4, pp. 295-308
Eastman, J.T., Lannoo, M.J., (2008) J. Morphol, 269, pp. 84-103
Evans, P., (2006) Acta Cryst., D62, pp. 72-82
Ito, N., Komiyama, N.H., Fermi, G., (1995) Z Mol. Biol., 250, pp. 648-658
Jones, T.A., Bergdoll, M., Kjeldgaard, M., (1990) Crystallography and Modelling Methods in Molecular Design, pp. 189-199. , edited by C. Bugg & S. Ealick, New York: Springer-Verlag
Mazzarella, L., Bonomi, G., Lubrano, M.C., Merlino, A., Vergara, A., Vitagliano, L., Verde, C., Di Prisco, G., (2006) Proteins, 62, pp. 316-321
Mazzarella, L., D'Avino, R., Di Prisco, G., Savino, C., Vitagliano, L., Moody, P.C., Zagari, A., (1999) J Mol. Biol., 287, pp. 897-906
Mazzarella, L., Vergara, A., Vitagliano, L., Merlino, A., Bonomi, G., Scala, S., Verde, C., Di Prisco, G., (2006) Proteins, 65, p. 490498
Merlino, A., Mazzarella, L., Di Fiore, A., Carannante, A., Notomista, E., Di Donato, A., Sica, F., (2005) J. Biol. Chem., 280, pp. 17953-17960
Merlino, A., Sica, F., Zagari, A., Mazzarella, L., Vergara, A., (2008) Biophys. Chem., 137, pp. 24-27
Merlino, A., Verde, C., Di Prisco, G., Mazzarella, L., Vergara, A., (2008) Spectroscopy, 22, pp. 143-152
Merlino, A., Vitagliano, L., Howes, B., Verde, C., Di Prisco, G., Smulevich, G., Sica, F., Vergara, A., (2009) Biopolymers, 91, pp. 1117-1125
Mylvaganam, S.E., Bonaventura, C., Bonaventura, J., Getzoff, E.D., (1996) Nature Struct. Biol, 3, pp. 275-283
Navaza, J., Saludjian, P., (1997) Methods Enzymol., 276, pp. 581-594
Otwinowski, Z., Minor, W., (1997) Methods Enzymol, 276, pp. 307-326
Perrakis, A., Harkiolaki, M., Wilson, K.S., Lamzin, V.S., (2001) Acta Cryst., DSL, pp. 1445-1450
Perutz, M.F., (1990) Annu. Rev. Physiol, 52, pp. 1-25
Riccio, A., Vitagliano, L., Di Prisco, G., Zagari, A., Mazzarella, L., (2002) Proc. NatlAcad. Sci. USA, 99, pp. 9801-9806
Tame, J.R., Wilson, J.C., Weber, R.E., (1996) Z Mol Biol., 259, pp. 749-760
Tilton, R., Dewan, J.C., Petsko, G., (1992) Biochemistry, 31, pp. 2469-2481
Verde, C., Vergara, A., Mazzarella, L., Di Prisco, G., (2008) Curr. Protein Pept. Sci., 9, pp. 578-590
Vergara, A., Franzese, M., Merlino, A., Bonomi, G., Verde, C., Giordano, D., Di Prisco, G., Mazzarella, L., (2009) Biophys. J., 97, pp. 866-874
Vergara, A., Merlino, A., Pizzo, E., D'Alessio, G., Mazzarella, L., (2008) Acta Cryst., 64, pp. 167-171
Vitagliano, L., Bonomi, G., Riecio, A., Di Prisco, G., Smulevich, G., Mazzarella, L., (2004) Eur. J. Biochem., 271, pp. 1651-1659
Vitagliano, L., Vergara, A., Bonomi, G., Merlino, A., Smulevich, G., Howes, B., Di Prisco, G., Mazzarella, L., (2008) J. Am. Chem. Soc., 130, pp. 10527-10535
Weiss, M.S., (2001) J Appl. Cryst., 34, pp. 130-135
Yokoyama, T., Chong, K.T., Miyazaki, G., Morimoto, H., Shih, D.T.B., Unzai, S., Tame, J.R.H., Park, S.-Y., (2004) J. Biol. Chem., 279, pp. 28632-28640
Cheng, C. -H. C., Chen, L., Near, T., Jin, Y., (2003) Mol. Biol. Evol., 20, pp. 1897-1908
Eastman, J. T., Lannoo, M. J., (2008) J. Morphol, 269, pp. 84-103
Jones, T. A., Bergdoll, M., Kjeldgaard, M., (1990) Crystallography and Modelling Methods in Molecular Design, pp. 189-199. , edited by C. Bugg & S. Ealick, New York: Springer-Verlag
Mylvaganam, S. E., Bonaventura, C., Bonaventura, J., Getzoff, E. D., (1996) Nature Struct. Biol, 3, pp. 275-283
Perutz, M. F., (1990) Annu. Rev. Physiol, 52, pp. 1-25
Tame, J. R., Wilson, J. C., Weber, R. E., (1996) Z Mol Biol., 259, pp. 749-760
Weiss, M. S., (2001) J Appl. Cryst., 34, pp. 130-135
Nucleosides Nucleotides Nucleic Acids (ISSN: 1744-3091, 1744-4309), 2010 Nov; 66: 1536-1540.
Export to BibTeX Export to EndNote
Paper type: Journal Article,
Impact factor: 0.563, 5-year impact factor: 0.479
Url: http://www.scopus.com/inward/record.url?eid=2-s2.0-78149334465&partnerID=40&md5=425cb4677aaad1ff480b15e08ecf146e
Keywords: Cold Adaptation, Eleginops Maclovinus, Haemichrome, Haemoglobin, Oxygen Affinity, Raman Microspectroscopy, Carboxyhemoglobin, Animal, Chemistry, Conference Paper, Crystallization, Perciformes, Raman Spectrometry, X Ray Crystallography, X-Ray, Spectrum Analysis,
Affiliations:
*** IBB - CNR ***
Department of Chemistry, University of Naples Federico II, 80126 Naples, Italy
Istituto di Biostrutture e Bioimmagini, CNR, 80134 Naples, Italy
Institute of Protein Biochemistry, CNR, 80131 Naples, Italy
References:
Bonaventura, C., Crumbliss, A.L., Weber, R.E., (2004) Acta Physiol. Scand., 182, pp. 245-25
Brickie, P., Arkhipkin, A.I., Shcherbich, Z.N., (2005) J. Mar. Biol. Assoc. U. K., 85, pp. 1217-1221
Brittain, T., (2005) J. Inorg. Biochem., 99, pp. 120-129
Camardella, L., Caruso, C., D'Avino, R., Di Prisco, G., Rutigliano, B., Tamburrini, M., Fermi, G., Perutz, M.R., (1992) J Mol. Biol., 224, p. 449460
Cheng, C.-H.C., Chen, L., Near, T., Jin, Y., (2003) Mol. Biol. Evol., 20, pp. 1897-1908
Coppola, D., Giordano, D., Vergara, A., Mazzarella, L., Di Prisco, G., Verde, C., Russo, R., (2010) Polar Sci., 4, pp. 295-308
Eastman, J.T., Lannoo, M.J., (2008) J. Morphol, 269, pp. 84-103
Evans, P., (2006) Acta Cryst., D62, pp. 72-82
Ito, N., Komiyama, N.H., Fermi, G., (1995) Z Mol. Biol., 250, pp. 648-658
Jones, T.A., Bergdoll, M., Kjeldgaard, M., (1990) Crystallography and Modelling Methods in Molecular Design, pp. 189-199. , edited by C. Bugg & S. Ealick, New York: Springer-Verlag
Mazzarella, L., Bonomi, G., Lubrano, M.C., Merlino, A., Vergara, A., Vitagliano, L., Verde, C., Di Prisco, G., (2006) Proteins, 62, pp. 316-321
Mazzarella, L., D'Avino, R., Di Prisco, G., Savino, C., Vitagliano, L., Moody, P.C., Zagari, A., (1999) J Mol. Biol., 287, pp. 897-906
Mazzarella, L., Vergara, A., Vitagliano, L., Merlino, A., Bonomi, G., Scala, S., Verde, C., Di Prisco, G., (2006) Proteins, 65, p. 490498
Merlino, A., Mazzarella, L., Di Fiore, A., Carannante, A., Notomista, E., Di Donato, A., Sica, F., (2005) J. Biol. Chem., 280, pp. 17953-17960
Merlino, A., Sica, F., Zagari, A., Mazzarella, L., Vergara, A., (2008) Biophys. Chem., 137, pp. 24-27
Merlino, A., Verde, C., Di Prisco, G., Mazzarella, L., Vergara, A., (2008) Spectroscopy, 22, pp. 143-152
Merlino, A., Vitagliano, L., Howes, B., Verde, C., Di Prisco, G., Smulevich, G., Sica, F., Vergara, A., (2009) Biopolymers, 91, pp. 1117-1125
Mylvaganam, S.E., Bonaventura, C., Bonaventura, J., Getzoff, E.D., (1996) Nature Struct. Biol, 3, pp. 275-283
Navaza, J., Saludjian, P., (1997) Methods Enzymol., 276, pp. 581-594
Otwinowski, Z., Minor, W., (1997) Methods Enzymol, 276, pp. 307-326
Perrakis, A., Harkiolaki, M., Wilson, K.S., Lamzin, V.S., (2001) Acta Cryst., DSL, pp. 1445-1450
Perutz, M.F., (1990) Annu. Rev. Physiol, 52, pp. 1-25
Riccio, A., Vitagliano, L., Di Prisco, G., Zagari, A., Mazzarella, L., (2002) Proc. NatlAcad. Sci. USA, 99, pp. 9801-9806
Tame, J.R., Wilson, J.C., Weber, R.E., (1996) Z Mol Biol., 259, pp. 749-760
Tilton, R., Dewan, J.C., Petsko, G., (1992) Biochemistry, 31, pp. 2469-2481
Verde, C., Vergara, A., Mazzarella, L., Di Prisco, G., (2008) Curr. Protein Pept. Sci., 9, pp. 578-590
Vergara, A., Franzese, M., Merlino, A., Bonomi, G., Verde, C., Giordano, D., Di Prisco, G., Mazzarella, L., (2009) Biophys. J., 97, pp. 866-874
Vergara, A., Merlino, A., Pizzo, E., D'Alessio, G., Mazzarella, L., (2008) Acta Cryst., 64, pp. 167-171
Vitagliano, L., Bonomi, G., Riecio, A., Di Prisco, G., Smulevich, G., Mazzarella, L., (2004) Eur. J. Biochem., 271, pp. 1651-1659
Vitagliano, L., Vergara, A., Bonomi, G., Merlino, A., Smulevich, G., Howes, B., Di Prisco, G., Mazzarella, L., (2008) J. Am. Chem. Soc., 130, pp. 10527-10535
Weiss, M.S., (2001) J Appl. Cryst., 34, pp. 130-135
Yokoyama, T., Chong, K.T., Miyazaki, G., Morimoto, H., Shih, D.T.B., Unzai, S., Tame, J.R.H., Park, S.-Y., (2004) J. Biol. Chem., 279, pp. 28632-28640
Cheng, C. -H. C., Chen, L., Near, T., Jin, Y., (2003) Mol. Biol. Evol., 20, pp. 1897-1908
Eastman, J. T., Lannoo, M. J., (2008) J. Morphol, 269, pp. 84-103
Jones, T. A., Bergdoll, M., Kjeldgaard, M., (1990) Crystallography and Modelling Methods in Molecular Design, pp. 189-199. , edited by C. Bugg & S. Ealick, New York: Springer-Verlag
Mylvaganam, S. E., Bonaventura, C., Bonaventura, J., Getzoff, E. D., (1996) Nature Struct. Biol, 3, pp. 275-283
Perutz, M. F., (1990) Annu. Rev. Physiol, 52, pp. 1-25
Tame, J. R., Wilson, J. C., Weber, R. E., (1996) Z Mol Biol., 259, pp. 749-760
Weiss, M. S., (2001) J Appl. Cryst., 34, pp. 130-135
Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form
The blood of the sub-Antarctic fish Eleginops maclovinus (Em) contains three haemoglobins. The major haemoglobin (Hb1Em) displays the Root effect, a drastic decrease in the oxygen affinity and a loss of cooperativity at acidic pH. The carbomonoxy form of HbEm1 has been crystallized in two different crystal forms, orthorhombic (Ortho) and hexagonal (Hexa), and high-resolution diffraction data have been collected for both forms (1.45 and 1.49 A resolution, respectively). The high-frequency resonance Raman spectra collected from the two crystal forms using excitation at 514 nm were almost indistinguishable. Hb1Em is the first sub-Antarctic fish Hb to be crystallized and its structural characterization will shed light on the molecular mechanisms of cold adaptation and the role of the Root effect in fish haemoglobins.
The blood of the sub-Antarctic fish Eleginops maclovinus (Em) contains three haemoglobins. The major haemoglobin (Hb1Em) displays the Root effect, a drastic decrease in the oxygen affinity and a loss of cooperativity at acidic pH. The carbomonoxy form of HbEm1 has been crystallized in two different crystal forms, orthorhombic (Ortho) and hexagonal (Hexa), and high-resolution diffraction data have been collected for both forms (1.45 and 1.49 A resolution, respectively). The high-frequency resonance Raman spectra collected from the two crystal forms using excitation at 514 nm were almost indistinguishable. Hb1Em is the first sub-Antarctic fish Hb to be crystallized and its structural characterization will shed light on the molecular mechanisms of cold adaptation and the role of the Root effect in fish haemoglobins.
Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form
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Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form
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Risitano AM, Imbriaco M, Marando L, Seneca E, Soscia E, Malcovati L, Iori AP, Pane F, Notaro R, Matarazzo M
* From perpetual haemosiderinuria to possible iron overload: iron redistribution in paroxysmal nocturnal haemoglobinuria patients on eculizumab by magnetic resonance imaging (325 views)
Br J Haematol (ISSN: 0007-1048, 0007-1048linking, 1365-2141electronic), 2012 Sep; 158(3): 415-418.
Impact Factor: 4.942
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Riccio A, Mangiapia G, Giordano D, Flagiello A, Tedesco R, Bruno S, Vergara A, Mazzarella L, di Prisco G, Pucci P, Paduano L, Verde C
* Polymerization of Hemoglobins in Arctic Fish: Lycodes reticulatus and Gadus morhua (287 views)
Iubmb Life (ISSN: 1521-6543, 1521-6551), 2011 May; 63(5): 346-354.
Impact Factor: 3.514
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Boechi L, Marti MA, Vergara A, Sica F, Mazzarella L, Estrin DA, Merlino A
* Protonation of Histidine 55 Affects the Oxygen Access to Heme in the Alpha Chain of the Hemoglobin from the Antarctic Fish Trematomus bernacchii (361 views)
Iubmb Life (ISSN: 1521-6543, 1521-6551), 2011 Mar; 63(3): 175-182.
Impact Factor: 3.514
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Coppola D, Giordano D, Vergara A, Mazzarella L, Di Prisco G, Verde C, Russo R
* The hemoglobins of sub-Antarctic fishes of the suborder Notothenioidei (257 views)
Polar Science (ISSN: 1873-9652), 2010 Sep; 4(2): 295-308.
Impact Factor: 31.477
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Giordano D, Boechi L, Vergara A, Marti MA, Samuni U, Dantsker D, Grassi L, Estrin DA, Friedman JM, Mazzarella L, Di Prisco G, Verde C
* The hemoglobins of the sub-Antarctic fish Cottoperca gobio, a phyletically basal species - oxygen-binding equilibria, kinetics and molecular dynamics (662 views)
Febs Journal (ISSN: 1742-464x), 2009 Apr; 276(8): 2266-2277.
Impact Factor: 3.042
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Verde C, Giordano D, Russo R, Riccio A, Vergara A, Mazzarella L, Di Prisco G
* Hemoproteins in the cold (264 views)
Marine Genomics (ISSN: 1874-7787), 2009 Mar; 2(1): 67-73.
Impact Factor: 1.2
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Verde C, Vergara A, Mazzarella L, Di Prisco G
* The Hemoglobins of Fishes Living at Polar Latitudes - Current Knowledge on Structural Adaptations in a Changing Environment (339 views)
Curr Protein Pept Sci (ISSN: 1389-2037, 1389-2037linking), 2008 Dec; 9(6): 578-590.
Impact Factor: 3.011
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Cigliano L, Maresca B, Salvatore A, Nino M, Monfrecola G, Ayala F, Carlucci A, Pugliese RC, Pedone C, Abrescia P
* Haptoglobin from psoriatic patients exhibits decreased activity in binding haemoglobin and inhibiting lecithin-cholesterol acyltransferase activity (355 views)
Journal Of The European Academy Of Dermatology And Venereology (ISSN: 1468-3083, 0926-9959), 2008 Apr; 22(4): 417-425.
Impact Factor: 2.276
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Vergara A, Verde C, Di Prisco G, Mazzarella L
* Bis-histidyl Ferric Adducts in Tetrameric Haemoglobins (163 views)
Protein Reviews, 2008; 9: N/D-N/D.
Impact Factor: 0
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Merlino A, Russo Krauss I, Castellano I, De Vendittis E, Vergara A, Sica F
* Crystallization and preliminary x-ray diffraction studies of a psychrophilic iron superoxide dismutase from Pseudoalteromonas haloplanktis (340 views)
Protein Pept Lett (ISSN: 0929-8665, 1875-5305), 2008; 15(4): 415-418.
Impact Factor: 1.281
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Giordano D, Vergara A, Lee HC, Peisach J, Balestrieri M, Mazzarella L, Parisi E, Di Priseo G, Verde C
* Hemoglobin structure/function and globin-gene evolution in the Arctic fish Liparis tunicatus (360 views)
Gene (ISSN: 0378-1119), 2007 Dec 30; 406(1-2): 58-68.
Impact Factor: 2.871
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Verde C, Vergara A, Giordano D, Mazzarella L, Di Prisco G
* The Root effect - a structural and evolutionary perspective (241 views)
Antarctic Science (ISSN: 0954-1020), 2007 Jun; 19(2): 271-278.
Impact Factor: 1.265
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Mazzarella L, Vergara A, Vitagliano L, Merlino A, Bonomi G, Scala S, Verde C, Di Prisco G
* High resolution crystal structure of deoxy hemoglobin from Trematomus bernacchii at different pH values: The role of histidine residues in modulating the strength of the root effect (379 views)
Proteins (ISSN: 0887-3585, 1097-0134, 1097-0134electronic), 2006 Nov 1; 65(2): 490-498.
Impact Factor: 3.73
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Riccio A, Vitagliano L, Di Prisco G, Zagari A, Mazzarella L
* Liganded and unliganded forms of Antarctic fish haemoglobins in polyethylene glycol: crystallization of an R-state haemichrome intermediate (358 views)
Acta Crystallogr D Biol Crystallogr (ISSN: 0907-4449, 0907-4449linking), 2001 Sep; 57: 1144-1146.
Impact Factor: 2.124
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Mazzarella L, D'Avino R, Di Prisco G, Savino C, Vitagliano L, Moody P, Zagari A
Crystal structure of Trematomus newnesi haemoglobin re-opens the Root effect question (340 views)
J Mol Biol (ISSN: 0022-2836, 1089-8638, 1089-8638electronic), 1999 Apr 16; 287(5): 897-906.
Impact Factor: 5.501
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Costanzo LL, De Guidi G, Giuffrida S, Rizzarelli E, Vecchio G
Determination of superoxide dismutase-like activity of copper(II) complexes. Relevance of the speciation for the correct interpretation of in vitro O2 - scavenger activity (467 views)
J Chem Res (ISSN: 0162-0134, 1873-3344, 0162-0134print), 1993 Jun; 50(4): 273-281.
Impact Factor: 1.342
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21 Records (19 excluding Abstracts).
Total impact factor: 93.384 (90.59 excluding Abstracts).
Total 5 year impact factor: 107.207 (104.54 excluding Abstracts).
Total impact factor: 93.384 (90.59 excluding Abstracts).
Total 5 year impact factor: 107.207 (104.54 excluding Abstracts).
305 views. Last view on Thursday 22 September 2022, 12:54:46
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